Structural Classification of Proteins
Family: Family 1 of glycosyl hydrolase
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a/b)
[51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold:
TIM beta/alpha-barrel
[51350]
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites
Superfamily:
(Trans)glycosidases
[51445]
uperfamily
Family:
Family 1 of glycosyl hydrolase
[51521]
Protein Domains:
Plant beta-glucosidase (myrosinase) [51522]
White mustard (Sinapis alba)
[TaxId: 3728]
[51523] (17)
1e4m
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[59226]
1e6s
complexed with fuc, gol, gox, man, nag, so4, xys, zn
chain m
[28919]
1e6q
complexed with fuc, gol, man, nag, ntz, so4, xys, zn
chain m
[28920]
1e71
complexed with asc, fuc, gol, man, nag, so4, xys, zn
chain m
[28921]
1e73
complexed with asc, fuc, g2f, gol, man, nag, so4, xys
chain m
[28922]
1e72
complexed with asc, fuc, gol, gox, man, nag, so4, xys, zn
chain m
[28923]
1e6x
complexed with fuc, gol, lgc, man, nag, so4, xys, zn
chain m
[28924]
1myr
complexed with fuc, gol, man, nag, so4, xys, zn
chain a
[28925]
1w9d
automatically matched to d1e4mm_
complexed with bma, fuc, gol, man, nag, seh, so4, xyp, zn
region m:3-501
[120778]
1e70
complexed with fuc, g2f, gol, man, nag, so4, xys, zn
chain m
[28926]
1w9b
automatically matched to d1e4mm_
complexed with bma, cgt, fuc, gol, man, nag, so4, xyp, zn
region m:3-501
[120777]
1dwa
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28928]
1dwf
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28927]
1dwg
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28929]
1dwh
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28930]
1dwi
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28931]
1dwj
complexed with fuc, gol, man, nag, so4, xys, zn
chain m
[28932]
Creeping white clover (Trifolium repens)
[TaxId: 3899]
[51524] (1)
Cyanogenic beta-glucosidase
1cbg
chain a
[28933]
Maize (Zea mays), zmglu1
[TaxId: 4577]
[51525] (9)
SQ
P49235
1v08
complexed with ntz; mutant
chain a
[108202]
chain b
[108203]
1h49
complexed with bgc, hbo; mutant
chain a
[83477]
chain b
[83478]
1hxj
chain a
[76729]
chain b
[76730]
1e55
complexed with dhr, glc; mutant
chain a
[28934]
chain b
[28935]
1e4l
complexed with gol; mutant
chain a
[28938]
chain b
[28939]
1e4n
complexed with hbo; mutant
chain a
[28936]
chain b
[28937]
1e56
complexed with glc, hbo; mutant
chain a
[28940]
chain b
[28941]
1e1f
complexed with psg
chain a
[28942]
chain b
[28943]
1e1e
Dhurrinase
chain a
[28944]
chain b
[28945]
Sorghum bicolor
[TaxId: 4558]
[110351] (2)
SQ
Q41290
1v02
chain a
[108194]
chain b
[108195]
chain c
[108196]
chain d
[108197]
chain e
[108198]
chain f
[108199]
1v03
complexed with bgc, ccn, iph; mutant
chain a
[108200]
6-phospho-beta-D-galactosidase, PGAL [51526]
Lactococcus lactis
[TaxId: 1358]
[51527] (4)
1pbg
CASP1
complexed with so4
chain a
[28946]
chain b
[28947]
3pbg
complexed with so4
chain a
[28951]
chain b
[28952]
4pbg
complexed with bgp; mutant
chain a
[28949]
chain b
[28950]
2pbg
complexed with so4; mutant
chain a
[28948]
Beta-glucosidase A [51528]
Bacillus polymyxa
[TaxId: 1406]
[51529] (5)
1e4i
complexed with g2f, nfg; mutant
chain a
[59225]
1uyq
complexed with g2f, nfg; mutant
region a:2-448
[119769]
1bgg
complexed with gco
chain a
[28953]
chain b
[28954]
chain c
[28955]
chain d
[28956]
1tr1
complexed with gol; mutant
chain a
[28957]
chain b
[28958]
chain c
[28959]
chain d
[28960]
1bga
chain a
[28961]
chain b
[28962]
chain c
[28963]
chain d
[28964]
Bacillus circulans, subsp. alkalophilus
[TaxId: 1397]
[51530] (1)
1qox
chain a
[28965]
chain b
[28966]
chain c
[28967]
chain d
[28968]
chain e
[28969]
chain f
[28970]
chain g
[28971]
chain h
[28972]
chain i
[28973]
chain j
[28974]
chain k
[28975]
chain l
[28976]
chain m
[28977]
chain n
[28978]
chain o
[28979]
chain p
[28980]
Streptomyces sp.
[TaxId: 1931]
[82248] (2)
1gnx
complexed with so4, suc
chain a
[76241]
chain b
[76242]
1gon
complexed with hg, so4
chain a
[76249]
chain b
[76250]
Thermotoga maritima
[TaxId: 2336]
[89475] (40)
SQ
Q08638
2j78
automatically matched to d1od0b_
complexed with act, ca, edo, gox
region a:3-445
[138099]
2j78
automatically matched to d1od0b_
complexed with act, ca, edo, gox
region b:3-444
[138100]
2cbu
automatically matched to d1od0b_
complexed with act, ca, cts
region a:3-445
[130192]
2cbu
automatically matched to d1od0b_
complexed with act, ca, cts
region b:3-444
[130193]
2j75
automatically matched to d1od0b_
complexed with act, ca, noy
region a:3-445
[138095]
2j75
automatically matched to d1od0b_
complexed with act, ca, noy
region b:3-444
[138096]
2j7b
automatically matched to d1od0b_
complexed with act, ca, ntz
region a:3-445
[138103]
2j7b
automatically matched to d1od0b_
complexed with act, ca, ntz
region b:3-445
[138104]
2j7g
automatically matched to d1od0b_
complexed with act, ca, gi4
region a:3-445
[138113]
2j7g
automatically matched to d1od0b_
complexed with act, ca, gi4
region b:3-445
[138114]
2cbv
automatically matched to d1od0b_
complexed with act, cgb
region a:3-445
[130194]
2cbv
automatically matched to d1od0b_
complexed with act, cgb
region b:3-444
[130195]
2j79
automatically matched to d1od0b_
complexed with act, ca, gtl
region a:3-445
[138101]
2j79
automatically matched to d1od0b_
complexed with act, ca, gtl
region b:3-445
[138102]
2j7h
automatically matched to d1od0b_
complexed with act, azf, ca
region a:3-445
[138115]
2j7h
automatically matched to d1od0b_
complexed with act, azf, ca
region b:3-444
[138116]
2vrj
automatically matched to d1od0b_
complexed with act, ca, ncw
region a:3-445
[153512]
2vrj
automatically matched to d1od0b_
complexed with act, ca, ncw
region b:3-445
[153513]
2jal
automatically matched to d1od0b_
complexed with act, ca, yll
region a:3-445
[138241]
2jal
automatically matched to d1od0b_
complexed with act, ca, yll
region b:3-445
[138242]
1uz1
complexed with ifl
chain a
[113456]
chain b
[113457]
2cet
automatically matched to d1od0b_
complexed with act, ca, pgi
region a:3-445
[130358]
2cet
automatically matched to d1od0b_
complexed with act, ca, pgi
region b:3-445
[130359]
2j77
automatically matched to d1od0b_
complexed with act, ca, noj
region a:3-445
[138097]
2j77
automatically matched to d1od0b_
complexed with act, ca, noj
region b:3-445
[138098]
2j7c
automatically matched to d1od0b_
complexed with act, ca, ide
region a:3-445
[138105]
2j7c
automatically matched to d1od0b_
complexed with act, ca, ide
region b:3-445
[138106]
1w3j
complexed with oxz
chain a
[109156]
chain b
[109157]
1oim
complexed with noj
chain a
[93065]
chain b
[93066]
2j7d
automatically matched to d1od0b_
complexed with act, ca, gi1
region a:3-445
[138107]
2j7d
automatically matched to d1od0b_
complexed with act, ca, gi1
region b:3-445
[138108]
2j7e
automatically matched to d1od0b_
complexed with act, ca, gi2
region a:3-445
[138109]
2j7e
automatically matched to d1od0b_
complexed with act, ca, gi2
region b:3-445
[138110]
2ces
automatically matched to d1od0b_
complexed with act, ca, gim
region a:3-445
[130356]
2ces
automatically matched to d1od0b_
complexed with act, ca, gim
region b:3-444
[130357]
2j7f
automatically matched to d1od0b_
complexed with act, ca, gi3
region a:3-445
[138111]
2j7f
automatically matched to d1od0b_
complexed with act, ca, gi3
region b:3-445
[138112]
1oif
complexed with ifm
chain a
[93049]
chain b
[93050]
1od0
chain a
[86818]
chain b
[86819]
1oin
complexed with g2f
chain a
[93067]
chain b
[93068]
Thermus thermophilus
[TaxId: 274]
[89476] (1)
1ug6
complexed with gol
chain a
[88490]
Thermus nonproteolyticus
[TaxId: 116039]
[89477] (1)
1np2
chain a
[85944]
chain b
[85945]
Archaeon Pyrococcus horikoshii
[TaxId: 53953]
[141785] (1)
SQ
O58104
1-423
1vff
region a:1-423
[120033]
beta-Glycosidase [51531]
Archaeon Sulfolobus solfataricus
[TaxId: 2287]
[51532] (14)
SQ
P22498
1uwu
complexed with act, gox
chain a
[108077]
chain b
[108078]
1uws
complexed with act, g2f
chain a
[108073]
chain b
[108074]
1uwt
complexed with act, gtl
chain a
[108075]
chain b
[108076]
1uwq
complexed with act
chain a
[108069]
chain b
[108070]
2ceq
automatically matched to d1uwqa_
complexed with act, gim
region a:1-489
[130352]
2ceq
automatically matched to d1uwqa_
complexed with act, gim
region b:1-489
[130353]
1uwr
complexed with act, gaf
chain a
[108071]
chain b
[108072]
2cer
automatically matched to d1uwqa_
complexed with act, pgi
region a:1-489
[130354]
2cer
automatically matched to d1uwqa_
complexed with act, pgi
region b:1-489
[130355]
1uwi
mutant
region a:1-489
[119759]
1uwi
automatically matched to 1UWI A:1-489
mutant
region b:1-489
[119760]
1uwi
automatically matched to 1UWI A:1-489
mutant
region c:1-489
[119761]
1uwi
automatically matched to 1UWI A:1-489
mutant
region d:1-489
[119762]
1gow
chain a
[28981]
chain b
[28982]
Archaeon Thermosphaera aggregans
[TaxId: 54254]
[51533] (1)
1qvb
chain a
[28983]
chain b
[28984]
Thioglucosidase [141786]
Cabbage aphid (Brevicoryne brassicae)
[TaxId: 69196]
[141787] (2)
SQ
Q95X01
3-464
1wcg
complexed with gol
region a:3-464
[120888]
1wcg
automatically matched to 1WCG A:3-464
complexed with gol
region b:3-464
[120889]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk