Structural Classification of Proteins
home mail help root up expand collapse

Family: Family 1 of glycosyl hydrolase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Family 1 of glycosyl hydrolase [51521]

Protein Domains:

  1. Plant beta-glucosidase (myrosinase) [51522]
    1. White mustard (Sinapis alba) [TaxId: 3728] [51523] (17)
      1. 1e4m picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [59226] picpiclink
      2. 1e6s picpic
        complexed with fuc, gol, gox, man, nag, so4, xys, zn
        1. chain m [28919] picpiclink
      3. 1e6q picpic
        complexed with fuc, gol, man, nag, ntz, so4, xys, zn
        1. chain m [28920] picpiclink
      4. 1e71 picpic
        complexed with asc, fuc, gol, man, nag, so4, xys, zn
        1. chain m [28921] picpiclink
      5. 1e73 picpic
        complexed with asc, fuc, g2f, gol, man, nag, so4, xys
        1. chain m [28922] picpiclink
      6. 1e72 picpic
        complexed with asc, fuc, gol, gox, man, nag, so4, xys, zn
        1. chain m [28923] picpiclink
      7. 1e6x picpic
        complexed with fuc, gol, lgc, man, nag, so4, xys, zn
        1. chain m [28924] picpiclink
      8. 1myr picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain a [28925] picpiclink
      9. 1w9d picpic
        automatically matched to d1e4mm_
        complexed with bma, fuc, gol, man, nag, seh, so4, xyp, zn
        1. region m:3-501 [120778] picpiclink
      10. 1e70 picpic
        complexed with fuc, g2f, gol, man, nag, so4, xys, zn
        1. chain m [28926] picpiclink
      11. 1w9b picpic
        automatically matched to d1e4mm_
        complexed with bma, cgt, fuc, gol, man, nag, so4, xyp, zn
        1. region m:3-501 [120777] picpiclink
      12. 1dwa picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28928] picpiclink
      13. 1dwf picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28927] picpiclink
      14. 1dwg picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28929] picpiclink
      15. 1dwh picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28930] picpiclink
      16. 1dwi picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28931] picpiclink
      17. 1dwj picpic
        complexed with fuc, gol, man, nag, so4, xys, zn
        1. chain m [28932] picpiclink
    2. Creeping white clover (Trifolium repens) [TaxId: 3899] [51524] (1)
      Cyanogenic beta-glucosidase
      1. 1cbg picpic
        1. chain a [28933] picpiclink
    3. Maize (Zea mays), zmglu1 [TaxId: 4577] [51525] (9)
      SQ P49235
      1. 1v08 picpic
        complexed with ntz; mutant
        1. chain a [108202] picpiclink
        2. chain b [108203] picpiclink
      2. 1h49 picpic
        complexed with bgc, hbo; mutant
        1. chain a [83477] picpiclink
        2. chain b [83478] picpiclink
      3. 1hxj picpic
        1. chain a [76729] picpiclink
        2. chain b [76730] picpiclink
      4. 1e55 picpic
        complexed with dhr, glc; mutant
        1. chain a [28934] picpiclink
        2. chain b [28935] picpiclink
      5. 1e4l picpic
        complexed with gol; mutant
        1. chain a [28938] picpiclink
        2. chain b [28939] picpiclink
      6. 1e4n picpic
        complexed with hbo; mutant
        1. chain a [28936] picpiclink
        2. chain b [28937] picpiclink
      7. 1e56 picpic
        complexed with glc, hbo; mutant
        1. chain a [28940] picpiclink
        2. chain b [28941] picpiclink
      8. 1e1f picpic
        complexed with psg
        1. chain a [28942] picpiclink
        2. chain b [28943] picpiclink
      9. 1e1e picpic
        Dhurrinase
        1. chain a [28944] picpiclink
        2. chain b [28945] picpiclink
    4. Sorghum bicolor [TaxId: 4558] [110351] (2)
      SQ Q41290
      1. 1v02 picpic
        1. chain a [108194] picpiclink
        2. chain b [108195] picpiclink
        3. chain c [108196] picpiclink
        4. chain d [108197] picpiclink
        5. chain e [108198] picpiclink
        6. chain f [108199] picpiclink
      2. 1v03 picpic
        complexed with bgc, ccn, iph; mutant
        1. chain a [108200] picpiclink
  2. 6-phospho-beta-D-galactosidase, PGAL [51526]
    1. Lactococcus lactis [TaxId: 1358] [51527] (4)
      1. 1pbg picpic
        CASP1
        complexed with so4
        1. chain a [28946] picpiclink
        2. chain b [28947] picpiclink
      2. 3pbg picpic
        complexed with so4
        1. chain a [28951] picpiclink
        2. chain b [28952] picpiclink
      3. 4pbg picpic
        complexed with bgp; mutant
        1. chain a [28949] picpiclink
        2. chain b [28950] picpiclink
      4. 2pbg picpic
        complexed with so4; mutant
        1. chain a [28948] picpiclink
  3. Beta-glucosidase A [51528]
    1. Bacillus polymyxa [TaxId: 1406] [51529] (5)
      1. 1e4i picpic
        complexed with g2f, nfg; mutant
        1. chain a [59225] picpiclink
      2. 1uyq picpic
        complexed with g2f, nfg; mutant
        1. region a:2-448 [119769] picpiclink
      3. 1bgg picpic
        complexed with gco
        1. chain a [28953] picpiclink
        2. chain b [28954] picpiclink
        3. chain c [28955] picpiclink
        4. chain d [28956] picpiclink
      4. 1tr1 picpic
        complexed with gol; mutant
        1. chain a [28957] picpiclink
        2. chain b [28958] picpiclink
        3. chain c [28959] picpiclink
        4. chain d [28960] picpiclink
      5. 1bga picpic
        1. chain a [28961] picpiclink
        2. chain b [28962] picpiclink
        3. chain c [28963] picpiclink
        4. chain d [28964] picpiclink
    2. Bacillus circulans, subsp. alkalophilus [TaxId: 1397] [51530] (1)
      1. 1qox picpic
        1. chain a [28965] picpiclink
        2. chain b [28966] picpiclink
        3. chain c [28967] picpiclink
        4. chain d [28968] picpiclink
        5. chain e [28969] picpiclink
        6. chain f [28970] picpiclink
        7. chain g [28971] picpiclink
        8. chain h [28972] picpiclink
        9. chain i [28973] picpiclink
        10. chain j [28974] picpiclink
        11. chain k [28975] picpiclink
        12. chain l [28976] picpiclink
        13. chain m [28977] picpiclink
        14. chain n [28978] picpiclink
        15. chain o [28979] picpiclink
        16. chain p [28980] picpiclink
    3. Streptomyces sp. [TaxId: 1931] [82248] (2)
      1. 1gnx picpic
        complexed with so4, suc
        1. chain a [76241] picpiclink
        2. chain b [76242] picpiclink
      2. 1gon picpic
        complexed with hg, so4
        1. chain a [76249] picpiclink
        2. chain b [76250] picpiclink
    4. Thermotoga maritima [TaxId: 2336] [89475] (40)
      SQ Q08638
      1. 2j78 picpic
        automatically matched to d1od0b_
        complexed with act, ca, edo, gox
        1. region a:3-445 [138099] picpiclink
      2. 2j78 picpic
        automatically matched to d1od0b_
        complexed with act, ca, edo, gox
        1. region b:3-444 [138100] picpiclink
      3. 2cbu picpic
        automatically matched to d1od0b_
        complexed with act, ca, cts
        1. region a:3-445 [130192] picpiclink
      4. 2cbu picpic
        automatically matched to d1od0b_
        complexed with act, ca, cts
        1. region b:3-444 [130193] picpiclink
      5. 2j75 picpic
        automatically matched to d1od0b_
        complexed with act, ca, noy
        1. region a:3-445 [138095] picpiclink
      6. 2j75 picpic
        automatically matched to d1od0b_
        complexed with act, ca, noy
        1. region b:3-444 [138096] picpiclink
      7. 2j7b picpic
        automatically matched to d1od0b_
        complexed with act, ca, ntz
        1. region a:3-445 [138103] picpiclink
      8. 2j7b picpic
        automatically matched to d1od0b_
        complexed with act, ca, ntz
        1. region b:3-445 [138104] picpiclink
      9. 2j7g picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi4
        1. region a:3-445 [138113] picpiclink
      10. 2j7g picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi4
        1. region b:3-445 [138114] picpiclink
      11. 2cbv picpic
        automatically matched to d1od0b_
        complexed with act, cgb
        1. region a:3-445 [130194] picpiclink
      12. 2cbv picpic
        automatically matched to d1od0b_
        complexed with act, cgb
        1. region b:3-444 [130195] picpiclink
      13. 2j79 picpic
        automatically matched to d1od0b_
        complexed with act, ca, gtl
        1. region a:3-445 [138101] picpiclink
      14. 2j79 picpic
        automatically matched to d1od0b_
        complexed with act, ca, gtl
        1. region b:3-445 [138102] picpiclink
      15. 2j7h picpic
        automatically matched to d1od0b_
        complexed with act, azf, ca
        1. region a:3-445 [138115] picpiclink
      16. 2j7h picpic
        automatically matched to d1od0b_
        complexed with act, azf, ca
        1. region b:3-444 [138116] picpiclink
      17. 2vrj picpic
        automatically matched to d1od0b_
        complexed with act, ca, ncw
        1. region a:3-445 [153512] picpiclink
      18. 2vrj picpic
        automatically matched to d1od0b_
        complexed with act, ca, ncw
        1. region b:3-445 [153513] picpiclink
      19. 2jal picpic
        automatically matched to d1od0b_
        complexed with act, ca, yll
        1. region a:3-445 [138241] picpiclink
      20. 2jal picpic
        automatically matched to d1od0b_
        complexed with act, ca, yll
        1. region b:3-445 [138242] picpiclink
      21. 1uz1 picpic
        complexed with ifl
        1. chain a [113456] picpiclink
        2. chain b [113457] picpiclink
      22. 2cet picpic
        automatically matched to d1od0b_
        complexed with act, ca, pgi
        1. region a:3-445 [130358] picpiclink
      23. 2cet picpic
        automatically matched to d1od0b_
        complexed with act, ca, pgi
        1. region b:3-445 [130359] picpiclink
      24. 2j77 picpic
        automatically matched to d1od0b_
        complexed with act, ca, noj
        1. region a:3-445 [138097] picpiclink
      25. 2j77 picpic
        automatically matched to d1od0b_
        complexed with act, ca, noj
        1. region b:3-445 [138098] picpiclink
      26. 2j7c picpic
        automatically matched to d1od0b_
        complexed with act, ca, ide
        1. region a:3-445 [138105] picpiclink
      27. 2j7c picpic
        automatically matched to d1od0b_
        complexed with act, ca, ide
        1. region b:3-445 [138106] picpiclink
      28. 1w3j picpic
        complexed with oxz
        1. chain a [109156] picpiclink
        2. chain b [109157] picpiclink
      29. 1oim picpic
        complexed with noj
        1. chain a [93065] picpiclink
        2. chain b [93066] picpiclink
      30. 2j7d picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi1
        1. region a:3-445 [138107] picpiclink
      31. 2j7d picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi1
        1. region b:3-445 [138108] picpiclink
      32. 2j7e picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi2
        1. region a:3-445 [138109] picpiclink
      33. 2j7e picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi2
        1. region b:3-445 [138110] picpiclink
      34. 2ces picpic
        automatically matched to d1od0b_
        complexed with act, ca, gim
        1. region a:3-445 [130356] picpiclink
      35. 2ces picpic
        automatically matched to d1od0b_
        complexed with act, ca, gim
        1. region b:3-444 [130357] picpiclink
      36. 2j7f picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi3
        1. region a:3-445 [138111] picpiclink
      37. 2j7f picpic
        automatically matched to d1od0b_
        complexed with act, ca, gi3
        1. region b:3-445 [138112] picpiclink
      38. 1oif picpic
        complexed with ifm
        1. chain a [93049] picpiclink
        2. chain b [93050] picpiclink
      39. 1od0 picpic
        1. chain a [86818] picpiclink
        2. chain b [86819] picpiclink
      40. 1oin picpic
        complexed with g2f
        1. chain a [93067] picpiclink
        2. chain b [93068] picpiclink
    5. Thermus thermophilus [TaxId: 274] [89476] (1)
      1. 1ug6 picpic
        complexed with gol
        1. chain a [88490] picpiclink
    6. Thermus nonproteolyticus [TaxId: 116039] [89477] (1)
      1. 1np2 picpic
        1. chain a [85944] picpiclink
        2. chain b [85945] picpiclink
    7. Archaeon Pyrococcus horikoshii [TaxId: 53953] [141785] (1)
      SQ O58104 1-423
      1. 1vff picpic
        1. region a:1-423 [120033] picpiclink
  4. beta-Glycosidase [51531]
    1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [51532] (14)
      SQ P22498
      1. 1uwu picpic
        complexed with act, gox
        1. chain a [108077] picpiclink
        2. chain b [108078] picpiclink
      2. 1uws picpic
        complexed with act, g2f
        1. chain a [108073] picpiclink
        2. chain b [108074] picpiclink
      3. 1uwt picpic
        complexed with act, gtl
        1. chain a [108075] picpiclink
        2. chain b [108076] picpiclink
      4. 1uwq picpic
        complexed with act
        1. chain a [108069] picpiclink
        2. chain b [108070] picpiclink
      5. 2ceq picpic
        automatically matched to d1uwqa_
        complexed with act, gim
        1. region a:1-489 [130352] picpiclink
      6. 2ceq picpic
        automatically matched to d1uwqa_
        complexed with act, gim
        1. region b:1-489 [130353] picpiclink
      7. 1uwr picpic
        complexed with act, gaf
        1. chain a [108071] picpiclink
        2. chain b [108072] picpiclink
      8. 2cer picpic
        automatically matched to d1uwqa_
        complexed with act, pgi
        1. region a:1-489 [130354] picpiclink
      9. 2cer picpic
        automatically matched to d1uwqa_
        complexed with act, pgi
        1. region b:1-489 [130355] picpiclink
      10. 1uwi picpic
        mutant
        1. region a:1-489 [119759] picpiclink
      11. 1uwi picpic
        automatically matched to 1UWI A:1-489
        mutant
        1. region b:1-489 [119760] picpiclink
      12. 1uwi picpic
        automatically matched to 1UWI A:1-489
        mutant
        1. region c:1-489 [119761] picpiclink
      13. 1uwi picpic
        automatically matched to 1UWI A:1-489
        mutant
        1. region d:1-489 [119762] picpiclink
      14. 1gow picpic
        1. chain a [28981] picpiclink
        2. chain b [28982] picpiclink
    2. Archaeon Thermosphaera aggregans [TaxId: 54254] [51533] (1)
      1. 1qvb picpic
        1. chain a [28983] picpiclink
        2. chain b [28984] picpiclink
  5. Thioglucosidase [141786]
    1. Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196] [141787] (2)
      SQ Q95X01 3-464
      1. 1wcg picpic
        complexed with gol
        1. region a:3-464 [120888] picpiclink
      2. 1wcg picpic
        automatically matched to 1WCG A:3-464
        complexed with gol
        1. region b:3-464 [120889] picpiclink

Enter search key:

MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk