Structural Classification of Proteins
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Family: 1,4-beta-N-acetylmuraminidase

Glycosyl hydrolase family 25; probably have evolved from a type II chitinase ancestor
permutation of the common fold; strand 8 is antiparallel to the rest of the barrel

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: 1,4-beta-N-acetylmuraminidase [63912]
    Glycosyl hydrolase family 25; probably have evolved from a type II chitinase ancestor
    permutation of the common fold; strand 8 is antiparallel to the rest of the barrel

Protein Domains:

  1. Streptomyces lysozyme [63913]
    supersedes and corrects the old structure from S. erythraeus; 0LZ6
    1. Streptomyces coelicolor, "mueller" dsm3030 [TaxId: 1902] [63914] (1)
      1. 1jfx picpic
        complexed with cl
        1. chain a [62943] picpiclink
  2. N-terminal domain of endolysin [89484]
    1. Bacteriophage cp-1 [TaxId: 10747] [89485] (6)
      1. 2j8g picpicxref
        automatically matched to d1h09a2
        complexed with ala, amv, fmt, lys, nag; mutant
        1. region a:2-190 [147916] picpiclink
      2. 2j8f picpicxref
        automatically matched to d1h09a2
        complexed with ala, amv, fmt, nag; mutant
        1. region a:2-190 [147914] picpiclink
      3. 2ixv picpicxref
        automatically matched to d1h09a2
        complexed with fmt, mu2, nag; mutant
        1. region a:2-190 [147833] picpiclink
      4. 1h09 picpicxref
        1. region a:2-190 [83421] picpiclink
      5. 2ixu picpicxref
        automatically matched to d1h09a2
        complexed with fmt, mu2, nag
        1. region a:2-190 [147831] picpiclink
      6. 1oba picpicxref
        complexed with cht
        1. region a:2-190 [92754] picpiclink
  3. Unnamed hypothetical protein [102082]
    homologue of BH2215 from the complete Bacillus halodurans genome
    1. Bacillus stearothermophilus [TaxId: 1422] [102083] (1)
      1. 1sfs picpic
        structural genomics
        complexed with po4
        1. chain a [98846] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk