Structural Classification of Proteins
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Family: PfkB-like kinase

includes a variety of carbohydrate and pyrimidine kinases

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribokinase-like [53612]
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. Superfamily: Ribokinase-like [53613]
    has extra strand located between strands 2 and 3
    link to SUPERFAMILY database - Superfamily
  5. Family: PfkB-like kinase [82515]
    includes a variety of carbohydrate and pyrimidine kinases

Protein Domains:

  1. Pyridoxal kinase [82516]
    1. Sheep (Ovis aries) [TaxId: 9940] [82517] (8)
      1. 1lhp picpic
        1. chain a [77960] picpiclink
        2. chain b [77961] picpiclink
      2. 1lhr picpic
        complexed with atp, k, zn
        1. chain a [77962] picpiclink
        2. chain b [77963] picpiclink
      3. 1rfv picpic
        complexed with adp, zn2
        1. chain a [97409] picpiclink
        2. chain b [97410] picpiclink
      4. 1ygj picpic
        automatically matched to d1rfua_
        complexed with rmc
        1. region a:4-312 [123144] picpiclink
      5. 1rft picpic
        complexed with acp, k, pxm, zn2
        1. chain a [97400] picpiclink
      6. 1rfu picpic
        complexed with adp, plp, zn2
        1. chain a [97401] picpiclink
        2. chain b [97402] picpiclink
        3. chain c [97403] picpiclink
        4. chain d [97404] picpiclink
        5. chain e [97405] picpiclink
        6. chain f [97406] picpiclink
        7. chain g [97407] picpiclink
        8. chain h [97408] picpiclink
      7. 1yhj picpic
        automatically matched to d1rfua_
        complexed with r6c
        1. region a:6-312 [123177] picpiclink
      8. 1ygk picpic
        automatically matched to d1rfua_
        complexed with rrc
        1. region a:4-312 [123145] picpiclink
  2. Pyridoxamine kinase [102638]
    1. Escherichia coli [TaxId: 562] [102639] (2)
      SQ P77150
      1. 1vi9 picpic
        structural genomics
        complexed with bme, so4
        1. chain a [100750] picpiclink
        2. chain b [100751] picpiclink
        3. chain c [100752] picpiclink
        4. chain d [100753] picpiclink
      2. 1td2 picpic
        complexed with pxl, so4
        1. chain a [106765] picpiclink
        2. chain b [106766] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk