Structural Classification of Proteins
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Family: Ribokinase-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribokinase-like [53612]
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. Superfamily: Ribokinase-like [53613]
    has extra strand located between strands 2 and 3
    link to SUPERFAMILY database - Superfamily
  5. Family: Ribokinase-like [53614]

Protein Domains:

  1. Ribokinase [53615]
    1. Escherichia coli [TaxId: 562] [53616] (5)
      1. 1rkd picpic
        complexed with adp, po4, rib
        1. chain a [34928] picpiclink
      2. 1rka picpic
        1. chain a [34929] picpiclink
      3. 1rk2 picpic
        complexed with adp, alf, mg, rib
        1. chain a [34930] picpiclink
        2. chain b [34931] picpiclink
        3. chain c [34932] picpiclink
        4. chain d [34933] picpiclink
      4. 1rks picpic
        complexed with po4, rib
        1. chain a [34934] picpiclink
      5. 1gqt picpic
        complexed with acp, cs, rib
        1. chain a [65472] picpiclink
        2. chain b [65473] picpiclink
        3. chain c [65474] picpiclink
        4. chain d [65475] picpiclink
    2. Thermotoga maritima [TaxId: 2336] [110706] (1)
      SQ Q9X055
      1. 1vm7 picpic
        Structural genomics target
        1. chain a [108884] picpiclink
        2. chain b [108885] picpiclink
    3. Human (Homo sapiens) [TaxId: 9606] [142709] (2)
      SQ Q9H477 15-322
      1. 2fv7 picpic
        complexed with adp, mg, na, unx
        1. region a:15-322 [134197] picpiclink
      2. 2fv7 picpic
        automatically matched to 2FV7 A:15-322
        complexed with adp, mg, na, unx
        1. region b:15-322 [134198] picpiclink
  2. 2-keto-3-deoxygluconate kinase [75295]
    1. Thermotoga maritima, TM0067 [TaxId: 2336] [75296] (2)
      1. 2afb picpic
        automatically matched to d1j5va_
        complexed with ca, ni; mutant
        1. region a:-2-330 [126674] picpiclink
      2. 2afb picpic
        automatically matched to d1j5va_
        complexed with ca, ni; mutant
        1. region b:0-330 [126675] picpiclink
    2. Thermus thermophilus [TaxId: 274] [102640] (4)
      1. 1v1a picpic
        structural genomics
        complexed with adp, kdg
        1. chain a [100249] picpiclink
        2. chain b [100250] picpiclink
      2. 1v19 picpic
        structural genomics
        complexed with dox
        1. chain a [100247] picpiclink
        2. chain b [100248] picpiclink
      3. 1v1b picpic
        structural genomics
        complexed with atp
        1. chain a [100251] picpiclink
        2. chain b [100252] picpiclink
        3. chain c [100253] picpiclink
        4. chain d [100254] picpiclink
      4. 1v1s picpic
        structural genomics
        1. chain a [100256] picpiclink
        2. chain b [100257] picpiclink
        3. chain c [100258] picpiclink
        4. chain d [100259] picpiclink
        5. chain e [100260] picpiclink
        6. chain f [100261] picpiclink
  3. Hypothetical protein TM0415 [102641]
    1. Thermotoga maritima [TaxId: 2336] [102642] (1)
      1. 1vk4 picpic
        structural genomics
        1. chain a [100850] picpiclink
  4. Putative sugar kinase TM0828 [82518]
    1. Thermotoga maritima [TaxId: 2336] [82519] (2)
      1. 2ajr picpic
        automatically matched to d1o14a_
        complexed with act, mg
        1. region a:1-319 [126892] picpiclink
      2. 2ajr picpic
        automatically matched to d1o14a_
        complexed with act, mg
        1. region b:1-319 [126893] picpiclink
  5. Adenosine kinase [53617]
    1. Human (Homo sapiens) [TaxId: 9606] [53618] (5)
      1. 1bx4 picpic
        complexed with adn, cl, mo4, mo6
        1. chain a [34935] picpiclink
      2. 2i6a picpic
        automatically matched to d1bx4a_
        complexed with 5i5
        1. region a:4-345 [137091] picpiclink
      3. 2i6a picpic
        automatically matched to d1bx4a_
        complexed with 5i5
        1. region b:4-345 [137092] picpiclink
      4. 2i6a picpic
        automatically matched to d1bx4a_
        complexed with 5i5
        1. region c:4-345 [137093] picpiclink
      5. 2i6a picpic
        automatically matched to d1bx4a_
        complexed with 5i5
        1. region d:4-345 [137094] picpiclink
    2. Toxoplasma gondii [TaxId: 5811] [53619] (10)
      1. 2abs picpic
        complexed with acp, cl, na; mutant
        1. region a:10-359 [126534] picpiclink
      2. 2a9y picpic
        automatically matched to 2ABS A:10-359
        complexed with 26a, act, cl, na; mutant
        1. region a:10-359 [126460] picpiclink
      3. 2a9z picpic
        automatically matched to 2ABS A:10-359
        complexed with 26a, acp, cl, na; mutant
        1. region a:10-359 [126461] picpiclink
      4. 2ab8 picpic
        automatically matched to 2ABS A:10-359
        complexed with acp, cl, mtp, na; mutant
        1. region a:10-359 [126515] picpiclink
      5. 2aa0 picpic
        automatically matched to 2ABS A:10-359
        complexed with act, cl, mtp, na; mutant
        1. region a:10-359 [126462] picpiclink
      6. 1dgm picpic
        complexed with acy, adn, cl, mg; mutant
        1. chain a [34936] picpiclink
      7. 1lii picpic
        complexed with acp, adn, cl, mg
        1. chain a [73921] picpiclink
      8. 1lij picpic
        complexed with acp, cl, mg, rpp
        1. chain a [73922] picpiclink
      9. 1lik picpic
        complexed with adn, cl, so4
        1. chain a [73923] picpiclink
      10. 1lio picpic
        1. chain a [73924] picpiclink
  6. Aminoimidazole riboside kinase [117720]
    1. Salmonella typhimurium [TaxId: 90371] [117721] (3)
      SQ Q8ZKR2
      1. 1tyy picpic
        complexed with k
        1. chain a [112850] picpiclink
        2. chain b [112851] picpiclink
      2. 1tz6 picpic
        complexed with acp, ais, k, mg
        1. chain a [112862] picpiclink
        2. chain b [112863] picpiclink
      3. 1tz3 picpic
        complexed with ais, k
        1. chain a [112860] picpiclink
        2. chain b [112861] picpiclink
  7. Tagatose-6-phosphate kinase LacC [142710]
    1. Enterococcus faecalis [TaxId: 1351] [142711] (4)
      SQ Q833W9 1-313
      1. 2f02 picpic
        automatically matched to 2AWD A:1-313
        complexed with atp
        1. region a:1-313 [132649] picpiclink
      2. 2f02 picpic
        automatically matched to 2AWD A:1-313
        complexed with atp
        1. region b:1-313 [132650] picpiclink
      3. 2awd picpic
        complexed with br
        1. region a:1-313 [127430] picpiclink
      4. 2awd picpic
        automatically matched to 2AWD A:1-313
        complexed with br
        1. region b:1-312 [127431] picpiclink
  8. Fructose 1-phosphate kinase FruB [142712]
    1. Bacillus halodurans [TaxId: 86665] [142713] (2)
      SQ Q9KEM5 1-306
      1. 2abq picpic
        complexed with po4
        1. region a:1-306 [126528] picpiclink
      2. 2abq picpic
        automatically matched to 2ABQ A:1-306
        complexed with po4
        1. region b:1-306 [126529] picpiclink
  9. Hypothetical fructokinase ST2478 [142714]
    1. Sulfolobus tokodaii [TaxId: 111955] [142715] (18)
      SQ Q96XN9 2-309
      1. 2dcn picpic
        complexed with adp, ckp, k, mg
        1. region a:2-309 [131374] picpiclink
      2. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region b:2-309 [131375] picpiclink
      3. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region c:2-309 [131376] picpiclink
      4. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region d:2-309 [131377] picpiclink
      5. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region e:2-309 [131378] picpiclink
      6. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region f:2-309 [131379] picpiclink
      7. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region g:2-309 [131380] picpiclink
      8. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region h:2-309 [131381] picpiclink
      9. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region i:2-309 [131382] picpiclink
      10. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region j:2-309 [131383] picpiclink
      11. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region k:2-309 [131384] picpiclink
      12. 2dcn picpic
        automatically matched to 2DCN A:2-309
        complexed with adp, ckp, k, mg
        1. region l:2-309 [131385] picpiclink
      13. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region a:2-309 [121438] picpiclink
      14. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region b:2-309 [121439] picpiclink
      15. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region c:2-309 [121440] picpiclink
      16. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region d:2-309 [121441] picpiclink
      17. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region e:2-309 [121442] picpiclink
      18. 1wye picpic
        automatically matched to 2DCN A:2-309
        1. region f:2-309 [121443] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk