Fold: AraD/HMP-PK domain-like

3 layers: a/b/a; mixed (mostly antiparallel) beta-sheet of 9 strands, order 432159876; left-handed crossover between strands 4 and 5

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: AraD/HMP-PK domain-like [53638]
   3 layers: a/b/a; mixed (mostly antiparallel) beta-sheet of 9 strands, order 432159876; left-handed crossover between strands 4 and 5

Superfamilies:

1. AraD/HMP-PK domain-like [53639] (2)
   uperfamily
   1. AraD-like aldolase/epimerase [53640] (4)
      metal (zinc)-ion dependent
      1. L-fuculose-1-phosphate aldolase [53641]
         class II aldolase
         1. Escherichia coli [TaxId: 562] [53642] (17)
            1. 1e4c
               complexed with bme, so4, zn; mutant
               1. chain p [34969]
            2. 1e4b
               complexed with bme, so4, zn; mutant
               1. chain p [34970]
            3. 1dzv
               complexed with bme, so4, zn; mutant
               1. chain p [34972]
            4. 1dzz
               complexed with bme, so4, zn; mutant
               1. chain p [34971]
            5. 1fua
               complexed with bme, so4, zn
               1. chain a [34973]
            6. 1dzu
               complexed with bme, so4, zn; mutant
               1. chain p [34975]
            7. 1e48
               complexed with 13p, bme, zn; mutant
               1. chain p [34974]
            8. 1e47
               complexed with 13p, bme, so4, zn; mutant
               1. chain p [34976]
            9. 2fua
               complexed with bme, co, so4
               1. chain a [34977]
            10. 1dzw
                complexed with bme, so4, zn; mutant
                1. chain p [34978]
            11. 1dzx
                complexed with bme, so4, zn; mutant
                1. chain p [34979]
            12. 1e4a
                complexed with bme, so4, zn; mutant
                1. chain p [34980]
            13. 4fua
                complexed with bme, pgh, so4, zn
                1. chain a [34983]
            14. 1e49
                complexed with bme, so4, zn; mutant
                1. chain p [34981]
            15. 3fua
                complexed with bme, cl, so4, zn
                1. chain a [34985]
            16. 1dzy
                complexed with bme, so4, zn; mutant
                1. chain p [34982]
            17. 1e46
                complexed with bme, so4, zn; mutant
                1. chain p [34984]
      2. L-ribulose-5-phosphate 4-epimerase [69597]
         1. Escherichia coli [TaxId: 562] [69598] (2)
            1. 1k0w
               complexed with zn; mutant
               1. chain a [77220]
               2. chain b [77221]
               3. chain c [77222]
               4. chain d [77223]
               5. chain e [77224]
               6. chain f [77225]
            2. 1jdi
               complexed with zn
               1. chain a [66551]
               2. chain b [66552]
               3. chain c [66553]
               4. chain d [66554]
               5. chain e [66555]
               6. chain f [66556]
      3. L-rhamnulose-1-phosphate aldolase [75301]
         1. Escherichia coli [TaxId: 562] [75302] (2)
            1. 1ojr
               complexed with 2ha, dox, gol, po4, zn; mutant
               1. chain a [93147]
            2. 1gt7
               complexed with pgh, zn
               1. chain a [70398]
               2. chain b [70399]
               3. chain c [70400]
               4. chain d [70401]
               5. chain e [70402]
               6. chain f [70403]
               7. chain g [70404]
               8. chain h [70405]
               9. chain i [70406]
               10. chain j [70407]
               11. chain k [70408]
               12. chain l [70409]
               13. chain m [70410]
               14. chain n [70411]
               15. chain o [70412]
               16. chain p [70413]
               17. chain q [70414]
               18. chain r [70415]
               19. chain s [70416]
               20. chain t [70417]
      4. Putative sugar-phosphate aldolase [102654]
         1. Thermotoga maritima [TaxId: 2336] [102655] (1)
            1. 1pvt
               structural genomics
               1. chain a [95189]
   2. Phosphomethylpyrimidine kinase C-terminal domain-like [159768] (2)
      1. Phosphomethylpyrimidine kinase [159769]
         1. Pyrococcus furiosus [TaxId: 2261] [159770] (2)
            SQ Q8U193 268-451
            1. 2pb9
               complexed with po4
               1. region a:268-451 [149352]
            2. 2pb9
               automatically matched to 2PB9 A:268-451
               complexed with po4
               1. region b:268-451 [149353]
      2. Uncharacterized protein MJ0236 [159771]
         1. Methanocaldococcus jannaschii [TaxId: 2190] [159772] (4)
            SQ Q57688 241-420
            1. 2php
               complexed with cl
               1. region a:241-420 [149474]
            2. 2php
               automatically matched to 2PHP A:241-420
               complexed with cl
               1. region b:241-420 [149475]
            3. 2php
               automatically matched to 2PHP A:241-420
               complexed with cl
               1. region d:241-420 [149476]
            4. 2php
               automatically matched to 2PHP A:241-420
               complexed with cl
               1. region e:241-420 [149477]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk