Structural Classification of Proteins
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Superfamily: AraD/HMP-PK domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: AraD/HMP-PK domain-like [53638]
    3 layers: a/b/a; mixed (mostly antiparallel) beta-sheet of 9 strands, order 432159876; left-handed crossover between strands 4 and 5
  4. Superfamily: AraD/HMP-PK domain-like [53639]
    link to SUPERFAMILY database - Superfamily

Families:

  1. AraD-like aldolase/epimerase [53640] (4)
    metal (zinc)-ion dependent
    1. L-fuculose-1-phosphate aldolase [53641]
      class II aldolase
      1. Escherichia coli [TaxId: 562] [53642] (17)
        1. 1e4c picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34969] picpiclink
        2. 1e4b picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34970] picpiclink
        3. 1dzv picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34972] picpiclink
        4. 1dzz picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34971] picpiclink
        5. 1fua picpic
          complexed with bme, so4, zn
          1. chain a [34973] picpiclink
        6. 1dzu picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34975] picpiclink
        7. 1e48 picpic
          complexed with 13p, bme, zn; mutant
          1. chain p [34974] picpiclink
        8. 1e47 picpic
          complexed with 13p, bme, so4, zn; mutant
          1. chain p [34976] picpiclink
        9. 2fua picpic
          complexed with bme, co, so4
          1. chain a [34977] picpiclink
        10. 1dzw picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34978] picpiclink
        11. 1dzx picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34979] picpiclink
        12. 1e4a picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34980] picpiclink
        13. 4fua picpic
          complexed with bme, pgh, so4, zn
          1. chain a [34983] picpiclink
        14. 1e49 picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34981] picpiclink
        15. 3fua picpic
          complexed with bme, cl, so4, zn
          1. chain a [34985] picpiclink
        16. 1dzy picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34982] picpiclink
        17. 1e46 picpic
          complexed with bme, so4, zn; mutant
          1. chain p [34984] picpiclink
    2. L-ribulose-5-phosphate 4-epimerase [69597]
      1. Escherichia coli [TaxId: 562] [69598] (2)
        1. 1k0w picpic
          complexed with zn; mutant
          1. chain a [77220] picpiclink
          2. chain b [77221] picpiclink
          3. chain c [77222] picpiclink
          4. chain d [77223] picpiclink
          5. chain e [77224] picpiclink
          6. chain f [77225] picpiclink
        2. 1jdi picpic
          complexed with zn
          1. chain a [66551] picpiclink
          2. chain b [66552] picpiclink
          3. chain c [66553] picpiclink
          4. chain d [66554] picpiclink
          5. chain e [66555] picpiclink
          6. chain f [66556] picpiclink
    3. L-rhamnulose-1-phosphate aldolase [75301]
      1. Escherichia coli [TaxId: 562] [75302] (2)
        1. 1ojr picpic
          complexed with 2ha, dox, gol, po4, zn; mutant
          1. chain a [93147] picpiclink
        2. 1gt7 picpic
          complexed with pgh, zn
          1. chain a [70398] picpiclink
          2. chain b [70399] picpiclink
          3. chain c [70400] picpiclink
          4. chain d [70401] picpiclink
          5. chain e [70402] picpiclink
          6. chain f [70403] picpiclink
          7. chain g [70404] picpiclink
          8. chain h [70405] picpiclink
          9. chain i [70406] picpiclink
          10. chain j [70407] picpiclink
          11. chain k [70408] picpiclink
          12. chain l [70409] picpiclink
          13. chain m [70410] picpiclink
          14. chain n [70411] picpiclink
          15. chain o [70412] picpiclink
          16. chain p [70413] picpiclink
          17. chain q [70414] picpiclink
          18. chain r [70415] picpiclink
          19. chain s [70416] picpiclink
          20. chain t [70417] picpiclink
    4. Putative sugar-phosphate aldolase [102654]
      1. Thermotoga maritima [TaxId: 2336] [102655] (1)
        1. 1pvt picpic
          structural genomics
          1. chain a [95189] picpiclink
  2. Phosphomethylpyrimidine kinase C-terminal domain-like [159768] (2)
    1. Phosphomethylpyrimidine kinase [159769]
      1. Pyrococcus furiosus [TaxId: 2261] [159770] (2)
        SQ Q8U193 268-451
        1. 2pb9 picpic
          complexed with po4
          1. region a:268-451 [149352] picpiclink
        2. 2pb9 picpic
          automatically matched to 2PB9 A:268-451
          complexed with po4
          1. region b:268-451 [149353] picpiclink
    2. Uncharacterized protein MJ0236 [159771]
      1. Methanocaldococcus jannaschii [TaxId: 2190] [159772] (4)
        SQ Q57688 241-420
        1. 2php picpic
          complexed with cl
          1. region a:241-420 [149474] picpiclink
        2. 2php picpic
          automatically matched to 2PHP A:241-420
          complexed with cl
          1. region b:241-420 [149475] picpiclink
        3. 2php picpic
          automatically matched to 2PHP A:241-420
          complexed with cl
          1. region d:241-420 [149476] picpiclink
        4. 2php picpic
          automatically matched to 2PHP A:241-420
          complexed with cl
          1. region e:241-420 [149477] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk