Structural Classification of Proteins
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Superfamily: Amidase signature (AS) enzymes

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Amidase signature (AS) enzymes [75303]
    possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. Superfamily: Amidase signature (AS) enzymes [75304]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Amidase signature (AS) enzymes [75305] (5)
    1. Malonamidase E2 [75306]
      1. Bradyrhizobium japonicum [TaxId: 375] [75307] (12)
        1. 1ock picpic
          1. chain a [86802] picpiclink
          2. chain b [86803] picpiclink
        2. 1o9p picpic
          complexed with mla; mutant
          1. chain a [92681] picpiclink
          2. chain b [92682] picpiclink
        3. 1o9q picpic
          mutant
          1. chain a [92683] picpiclink
          2. chain b [92684] picpiclink
        4. 1och picpic
          mutant
          1. chain a [92774] picpiclink
          2. chain b [92775] picpiclink
        5. 1obj picpic
          mutant
          1. chain a [92757] picpiclink
          2. chain b [92758] picpiclink
        6. 1ocm picpic
          complexed with pop
          1. chain a [86806] picpiclink
          2. chain b [86807] picpiclink
        7. 1o9n picpic
          mutant
          1. chain a [92677] picpiclink
          2. chain b [92678] picpiclink
        8. 1obl picpic
          complexed with mla; mutant
          1. chain a [92761] picpiclink
          2. chain b [92762] picpiclink
        9. 1ocl picpic
          complexed with mla
          1. chain a [86804] picpiclink
          2. chain b [86805] picpiclink
        10. 1obk picpic
          mutant
          1. chain a [92759] picpiclink
          2. chain b [92760] picpiclink
        11. 1obi picpic
          mutant
          1. chain a [92755] picpiclink
          2. chain b [92756] picpiclink
        12. 1o9o picpic
          complexed with mlm; mutant
          1. chain a [92679] picpiclink
          2. chain b [92680] picpiclink
    2. Peptide amidase Pam [82529]
      1. Stenotrophomonas maltophilia [TaxId: 40324] [82530] (2)
        1. 1m22 picpic
          complexed with epe
          1. chain a [78464] picpiclink
          2. chain b [78465] picpiclink
        2. 1m21 picpic
          complexed with chy
          1. chain a [78462] picpiclink
          2. chain b [78463] picpiclink
    3. Fatty acid amide hydrolase (oleamide hydrolase) [82531]
      elaborated fold with additional helices
      1. Rat (Rattus norvegicus) [TaxId: 10116] [82532] (1)
        1. 1mt5 picpic
          complexed with may
          1. chain a [79430] picpiclink
          2. chain b [79431] picpiclink
          3. chain c [79432] picpiclink
          4. chain d [79433] picpiclink
          5. chain e [79434] picpiclink
          6. chain f [79435] picpiclink
          7. chain g [79436] picpiclink
          8. chain h [79437] picpiclink
          9. chain i [79438] picpiclink
          10. chain j [79439] picpiclink
          11. chain k [79440] picpiclink
          12. chain l [79441] picpiclink
          13. chain m [79442] picpiclink
          14. chain n [79443] picpiclink
          15. chain o [79444] picpiclink
          16. chain p [79445] picpiclink
    4. Glutamyl-tRNA(Gln) amidotransferase subunit A [142738]
      1. Staphylococcus aureus [TaxId: 1280] [142739] (5)
        SQ P63488 1-485
        1. 2f2a picpicxrefxrefxref
          automatically matched to 2DF4 A:1-485
          complexed with gln, mg
          1. region a:1-485 [132801] picpiclink
        2. 2g5h picpicxrefxrefxref
          automatically matched to 2DF4 A:1-485
          complexed with mg
          1. region a:1-485 [134658] picpiclink
        3. 2dqn picpicxrefxrefxref
          automatically matched to 2DF4 A:1-485
          complexed with asn, mg
          1. region a:1-485 [131639] picpiclink
        4. 2df4 picpicxrefxrefxref
          complexed with mn
          1. region a:1-485 [131445] picpiclink
        5. 2g5i picpicxrefxrefxref
          automatically matched to 2DF4 A:1-485
          complexed with adp, mg
          1. region a:1-485 [134662] picpiclink
      2. Thermotoga maritima [TaxId: 2336] [142740] (1)
        SQ Q9X0Z9 1-475
        1. 2gi3 picpic
          complexed with act, mpd
          1. region a:1-475 [135220] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk