Structural Classification of Proteins
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Superfamily: Aspartate/glutamate racemase

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: ATC-like [53670]
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
  4. Superfamily: Aspartate/glutamate racemase [53681]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Aspartate/glutamate racemase [53682] (3)
    C-terminal extension is added to the N-terminal domain
    1. Glutamate racemase [53683]
      1. Aquifex pyrophilus [TaxId: 2714] [53684] (2)
        1. 1b74 picpic
          1. region a:1-105 [35264] picpiclink
          2. region a:106-252 [35265] picpiclink
        2. 1b73 picpic
          1. region a:1-105 [35266] picpiclink
          2. region a:106-252 [35267] picpiclink
    2. Aspartate racemase [75310]
      1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [75311] (2)
        1. 1jfl picpic
          1. region a:1-115 [71656] picpiclink
          2. region a:116-228 [71657] picpiclink
          3. region b:1-115 [71658] picpiclink
          4. region b:116-228 [71659] picpiclink
        2. 1iu9 picpic
          complexed with ca
          1. chain a [90694] picpiclink
      2. Pyrococcus horikoshii OT3 [TaxId: 70601] [159783] (2)
        1. 2dx7 picpic
          automatically matched to d1iu9a_
          complexed with cit; mutant
          1. region a:103-213 [146599] picpiclink
        2. 2dx7 picpic
          automatically matched to d1iu9a_
          complexed with cit; mutant
          1. region b:103-213 [146600] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk