Fold: SpoIIaa-like

core: 4 turns of a (beta-alpha)n superhelix

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: SpoIIaa-like [52086]
   core: 4 turns of a (beta-alpha)n superhelix

Superfamilies:

1. CRAL/TRIO domain [52087] (1)
   uperfamily
   1. CRAL/TRIO domain [52088] (3)
      Pfam 00650
      1. C-terminal domain of phosphatidylinositol transfer protein sec14p [52089]
         1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52090] (1)
      2. Alpha-tocopherol transfer protein [102203]
         1. Human (Homo sapiens) [TaxId: 9606] [102204] (3)
      3. Supernatant protein factor (SPF), middle domain [102205]
         Sec14-like protein 2; contains extra C-terminal beta-sandwich domain
         1. Human (Homo sapiens) [TaxId: 9606] [102206] (2)
            SQ O76054
2. SpoIIaa-like [52091] (2)
   uperfamily
   1. Anti-sigma factor antagonist SpoIIaa [52092] (4)
      1. Anti-sigma factor antagonist SpoIIaa [52093]
         1. Bacillus sphaericus [TaxId: 1421] [63953] (3)
         2. Bacillus subtilis [TaxId: 1423] [52094] (2)
         3. Bacillus stearothermophilus [TaxId: 1422] [110448] (4)
            SQ O32726 # 90% sequence identity
         4. Thermotoga maritima [TaxId: 2336] [110449] (3)
            SQ Q9X1F5; TM1442
   2. Sfri0576-like [159456] (2)
      significant structural variability despite high sequence similarity
      1. Uncharacterized protein Shew3102 [159457]
         1. Shewanella loihica [TaxId: 359303] [159458] (2)
            SQ A3QHM0 1-125
      2. Hypothetical protein Sfri0576 [159459]
         1. Shewanella frigidimarina [TaxId: 56812] [159460] (2)
            SQ Q087X8 2-126

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk