Structural Classification of Proteins
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Family: DegV-like

Pfam 02645, DUF194

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: DAK1/DegV-like [82548]
    2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]
  4. Superfamily: DAK1/DegV-like [82549]
    domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different
    link to SUPERFAMILY database - Superfamily
  5. Family: DegV-like [82550]
    Pfam 02645, DUF194

Protein Domains:

  1. Hypothetical protein TM841 [82551]
    reveals fatty acid binding function
    1. Thermotoga maritima [TaxId: 2336] [82552] (2)
      SQ Q9X1H9
      1. 1mgp picpic
        structural genomics
        complexed with mse, plm
        1. chain a [79098] picpiclink
      2. 1vpv picpic
        Structural genomics target
        complexed with plm, po4
        1. chain a [113975] picpiclink
        2. chain b [113976] picpiclink
  2. Hypothetical protein apc36103 [102686]
    lipid-binding protein; Bacilus subtilis YitS ortholog
    1. Bacillus stearothermophilus [TaxId: 1422] [102687] (1)
      1. 1pzx picpic
        structural genomics
        complexed with plm
        1. chain a [95484] picpiclink
        2. chain b [95485] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk