Fold: PEP carboxykinase-like

contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: PEP carboxykinase-like [53794]
   contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side

Superfamilies:

1. PEP carboxykinase-like [53795] (2)
   uperfamily
   1. PEP carboxykinase C-terminal domain [53796] (4)
      1. Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) [68921]
         1. Escherichia coli [TaxId: 562] [53798] (10)
            1. 2olr
               automatically matched to d1aq2_1
               complexed with atp, cl, co2, mg
               1. region a:228-540 [139140]
            2. 1ayl
               complexed with atp, mg, oxl
               1. region a:228-540 [64718]
            3. 1os1
               complexed with atp, ca, mg, pyr
               1. region a:228-540 [93467]
            4. 2olq
               automatically matched to d1aq2_1
               complexed with atp, co2, mg, mn
               1. region a:228-540 [139138]
            5. 2py7
               automatically matched to d1aq2a1
               complexed with atp, mg, mn; mutant
               1. region x:228-540 [149933]
            6. 1oen
               complexed with act
               1. region a:228-540 [64750]
            7. 1k3d
               complexed with adp, af3, mg
               1. region a:228-540 [68101]
            8. 1aq2
               complexed with atp, mg, mn, pyr
               1. region a:228-540 [64716]
            9. 1k3c
               complexed with adp, af3, mg, pyr
               1. region a:228-540 [68099]
            10. 2pxz
                automatically matched to d1aq2a1
                complexed with atp, co2, mg, mn, oaa
                1. region x:228-540 [149926]
         2. Thermus thermophilus [TaxId: 274] [82553] (7)
            SQ Q7SIC6
            1. 1j3b
               complexed with ca, gol, po4
               1. region a:212-529 [77071]
               2. region b:212-528 [77073]
            2. 1xkv
               automatically matched to d1j3ba1
               complexed with atp, ca, gol, po4
               1. region a:212-529 [122089]
            3. 1xkv
               automatically matched to d1j3ba1
               complexed with atp, ca, gol, po4
               1. region b:212-528 [122091]
            4. 2pc9
               automatically matched to d1j3ba1
               complexed with atp, ca, po4
               1. region a:212-527 [149378]
            5. 2pc9
               automatically matched to d1j3ba1
               complexed with atp, ca, po4
               1. region b:212-527 [149380]
            6. 2pc9
               automatically matched to d1j3ba1
               complexed with atp, ca, po4
               1. region c:212-527 [149382]
            7. 2pc9
               automatically matched to d1j3ba1
               complexed with atp, ca, po4
               1. region d:212-527 [149384]
         3. Trypanosoma cruzi [TaxId: 5693] [69611] (1)
            1. 1ii2
               complexed with so4
               1. region a:201-523 [66146]
               2. region b:201-523 [66148]
      2. Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612]
         1. Human (Homo sapiens) [TaxId: 9606] [69613] (8)
            1. 1khb
               complexed with act, edo, gto, mn
               1. region a:260-622 [68606]
            2. 1nhx
               complexed with edo, ftb, mn, na, pep
               1. region a:260-622 [91886]
            3. 1khf
               complexed with edo, mn, na, pep
               1. region a:260-622 [68611]
            4. 1m51
               complexed with act, edo, mn, tsx
               1. region a:260-622 [91186]
            5. 1khg
               complexed with edo, mn
               1. region a:260-622 [68613]
            6. 1khe
               complexed with gto, mn
               1. region a:260-622 [68609]
            7. 2gmv
               automatically matched to d1khba1
               complexed with mn, pep, un8
               1. region a:260-622 [135394]
            8. 2gmv
               automatically matched to d1khba1
               complexed with mn, pep, un8
               1. region b:260-622 [135396]
   2. HPr kinase HprK C-terminal domain [64186] (3)
      1. HPr kinase HprK C-terminal domain [64187]
         1. Lactobacillus casei [TaxId: 1582] [64188] (3)
            1. 1kkm
               C-terminal domain in complex with P-Ser-HPr
               complexed with ca, po4, sep; mutant
               1. chain a [72654]
               2. chain b [72655]
               3. chain c [72656]
            2. 1kkl
               C-terminal domain in complex with HPr
               complexed with ca; mutant
               1. chain a [72648]
               2. chain b [72649]
               3. chain c [72650]
            3. 1jb1
               C-terminal domain only
               complexed with po4
               1. chain a [62832]
         2. Staphylococcus xylosus [TaxId: 1288] [75326] (1)
            1. 1ko7
               complexed with po4
               1. region a:130-298 [72798]
               2. region b:130-298 [72800]
         3. Mycoplasma pneumoniae [TaxId: 2104] [82554] (1)
            1. 1knx
               1. region a:133-309 [77460]
               2. region b:133-308 [77462]
               3. region c:133-311 [77464]
               4. region d:133-307 [77466]
               5. region e:133-311 [77468]
               6. region f:133-307 [77470]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk