Structural Classification of Proteins
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Family: Ornithine cyclodeaminase-like

Pfam 02423; contains additional alpha+beta dimerisation subdomain mostly formed by the N-terminal meander beta-sheet

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Ornithine cyclodeaminase-like [110436]
    Pfam 02423; contains additional alpha+beta dimerisation subdomain mostly formed by the N-terminal meander beta-sheet

Protein Domains:

  1. Archaeal alanine dehydrogenase [110437]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [110438] (2)
      SQ O28608 # Rossmann-fold core (101-292) begins with an N-terminal helix and ends with a beta-strand
      1. 1omo picpic
        complexed with na, nad
        1. chain a [104017] picpiclink
        2. chain b [104018] picpiclink
      2. 1vll picpic
        Structural genomics target
        mutant
        1. chain a [108834] picpiclink
        2. chain b [108835] picpiclink
  2. Ornithine cyclodeaminase [117437]
    1. Pseudomonas putida [TaxId: 303] [117438] (2)
      SQ Q88H32
      1. 1x7d picpic
        complexed with mes, mpd, na, nad, orn
        1. chain a [114927] picpiclink
        2. chain b [114928] picpiclink
      2. 1u7h picpic
        complexed with mpd, na, nad
        1. chain a [113085] picpiclink
        2. chain b [113086] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk