Structural Classification of Proteins
Family: Ribosomal protein L13
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a/b)
[51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold:
Ribosomal protein L13
[52160]
3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 3214
Superfamily:
Ribosomal protein L13
[52161]
uperfamily
Family:
Ribosomal protein L13
[52162]
Protein Domains:
Ribosomal protein L13 [52163]
synonym: 50S ribosomal protein L13p, HMAL13
Archaeon Pyrococcus horikoshii
[TaxId: 53953]
[82339] (1)
1j3a
chain a
[77070]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[52164] (44)
SQ
P29198
1vqo
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region j:4-145
[120371]
1vq8
automatically matched to d1ffkg_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region j:4-145
[120197]
1vqp
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region j:4-145
[120400]
1jj2
complexed with cd, cl, k, mg, na
chain i
[63094]
1yhq
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region j:4-145
[123192]
1vql
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region j:4-145
[120284]
1vqk
automatically matched to d1ffkg_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region j:4-145
[120255]
1s72
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
chain j
[105329]
1vqm
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region j:4-145
[120313]
1vqn
automatically matched to d1ffkg_
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region j:4-145
[120342]
1yi2
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region j:4-145
[123239]
1yij
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region j:4-145
[123307]
1vq7
automatically matched to d1ffkg_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region j:4-145
[120168]
1vq4
automatically matched to d1ffkg_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region j:4-145
[120081]
2otl
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region j:4-145
[139355]
1vq5
automatically matched to d1ffkg_
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region j:4-145
[120110]
1vq9
automatically matched to d1ffkg_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region j:4-145
[120226]
1m90
complexed with aca, cd, cl, k, mg, na, pha, sps
chain k
[78849]
1yit
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region j:4-145
[123350]
1vq6
automatically matched to d1ffkg_
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region j:4-145
[120139]
2otj
automatically matched to d1ffkg_
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region j:4-145
[139326]
1yjw
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region j:4-145
[123474]
1nji
complexed with cd, cl, clm, k, mg, na; mutant
chain k
[85802]
1kqs
complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
chain i
[68824]
1kc8
complexed with bls, cd, cl, k, mg, na
chain k
[84366]
1yjn
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region j:4-145
[123442]
1n8r
complexed with cd, cl, k, mg, na, vir; mutant
chain k
[85438]
1k73
complexed with anm, cd, cl, k, mg, na
chain k
[84327]
1yj9
automatically matched to d1ffkg_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region j:4-145
[123403]
1qvg
complexed with cd, cl, k, mg, na
chain i
[96401]
1q82
complexed with cd, cl, k, mg, na, ppu
chain k
[96138]
1qvf
complexed with cd, cl, k, mg, na
chain i
[96371]
1q81
complexed with cd, cl, k, mg, na, ppu
chain k
[96108]
1k9m
complexed with cd, cl, k, mg, na, tyk
chain k
[72222]
1kd1
complexed with cd, cl, k, mg, na, spr
chain k
[72333]
1k8a
complexed with cai, cd, cl, k, mg, na
chain k
[72155]
1m1k
complexed with cd, cl, k, mg, na, zit
chain k
[74393]
1q86
complexed with cd, cl, k, mg, na, pha
chain k
[96176]
1q7y
complexed with cd, cl, k, mg, na, po4, puy
chain k
[96074]
1ffk
complexed with cd, k, mo3; mutant
chain g
[31035]
1yl3
automatically matched to d1ffkg_
region m:4-141
[123588]
2b66
automatically matched to d1ffkg_
region n:4-141
[127963]
2b9n
automatically matched to d1ffkg_
region n:4-141
[128155]
2b9p
automatically matched to d1ffkg_
region n:4-141
[128192]
Thermus thermophilus
[TaxId: 274]
[159473] (10)
SQ
P60488
1-139
2j01
Representative structure
region n:1-139
[145571]
2j03
automatically matched to 2J01 N:1-139
complexed with lys
region n:1-139
[145598]
3d5b
automatically matched to 2J01 N:1-139
complexed with mg
region n:25-161
[157360]
3d5d
automatically matched to 2J01 N:1-139
complexed with mg
region n:25-161
[157390]
2v47
automatically matched to 2J01 N:1-139
region n:1-139
[152514]
2v49
automatically matched to 2J01 N:1-139
region n:1-139
[152549]
2hgq
automatically matched to 2J01 N:1-139
region m:2-139
[145348]
1vsa
automatically matched to 2J01 N:1-139
region h:25-161
[144521]
2hgj
automatically matched to 2J01 N:1-139
region m:2-139
[145316]
2hgu
automatically matched to 2J01 N:1-139
region m:2-139
[145380]
Escherichia coli
[TaxId: 562]
[159474] (29)
SQ
P02410
1-140
2gyc
automatically matched to 2AW4 J:1-140
region h:1-140
[145269]
2gya
automatically matched to 2AW4 J:1-140
region h:1-140
[145247]
2qam
automatically matched to 2AW4 J:1-140
complexed with mg, nmy, zn
region j:1-140
[150250]
2qao
automatically matched to 2AW4 J:1-140
complexed with mg, nmy, zn
region j:1-140
[150303]
2i2t
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[145452]
2i2v
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[145494]
2qbe
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[150470]
2qbg
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[150524]
2qoz
automatically matched to 2AW4 J:1-140
complexed with mg, nmy, zn
region j:1-140
[151126]
2qp1
automatically matched to 2AW4 J:1-140
complexed with mg, nmy, zn
region j:1-140
[151179]
3df2
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[157639]
3df4
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[157693]
2qba
automatically matched to 2AW4 J:1-140
complexed with lll, mg, zn
region j:1-140
[150363]
2qbc
automatically matched to 2AW4 J:1-140
complexed with lll, mg, zn
region j:1-140
[150416]
2qbi
automatically matched to 2AW4 J:1-140
complexed with lll, mg, zn
region j:1-140
[150578]
2qbk
automatically matched to 2AW4 J:1-140
complexed with lll, mg, zn
region j:1-140
[150632]
2qov
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[151020]
2qox
automatically matched to 2AW4 J:1-140
complexed with mg, zn
region j:1-140
[151073]
1vs6
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[144467]
1vs8
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[144508]
2aw4
Representative structure
complexed with mg
region j:1-140
[144876]
2awb
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[144917]
2z4l
automatically matched to 2AW4 J:1-140
complexed with mg, par, zn
region j:1-140
[154088]
2z4n
automatically matched to 2AW4 J:1-140
complexed with mg, par, zn
region j:1-140
[154142]
2vhm
automatically matched to 2AW4 J:1-140
complexed with mg; mutant
region j:1-140
[153073]
2vhn
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[153105]
2rdo
automatically matched to 2AW4 J:1-140
region j:1-140
[151950]
2j28
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[145633]
3bbx
automatically matched to 2AW4 J:1-140
complexed with mg
region j:1-140
[155107]
Deinococcus radiodurans
[TaxId: 1299]
[159475] (6)
SQ
Q9RXY1
30-171
2zjr
Representative structure
complexed with mg
region g:30-171
[154560]
1xbp
automatically matched to 2ZJR G:30-171
complexed with mul
region h:30-171
[145874]
2zjq
automatically matched to 2ZJR G:30-171
region g:30-171
[154531]
3cf5
automatically matched to 2ZJR G:30-171
complexed with mg, txx
region g:30-171
[156547]
2zjp
automatically matched to 2ZJR G:30-171
complexed with mg, nsh, zn
region g:30-171
[154499]
3dll
automatically matched to 2ZJR G:30-171
complexed with mg, zld, zn
region g:30-171
[157784]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk