Structural Classification of Proteins
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Family: Succinyl-CoA synthetase domains

contain additional N-terminal strand "0", antiparallel to strand 2

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Flavodoxin-like [52171]
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. Superfamily: Succinyl-CoA synthetase domains [52210]
    link to SUPERFAMILY database - Superfamily
  5. Family: Succinyl-CoA synthetase domains [52211]
    contain additional N-terminal strand "0", antiparallel to strand 2

Protein Domains:

  1. Succinyl-CoA synthetase, alpha-chain, C-terminal domain [52212]
    1. Escherichia coli [TaxId: 562] [52213] (18)
      1. 2nu7 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        1. region a:122-287 [148405] picpiclink
      2. 2nu8 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, gol, po4, so4; mutant
        1. region a:122-287 [148413] picpiclink
      3. 2nu7 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        1. region d:122-287 [148409] picpiclink
      4. 2nu8 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, gol, po4, so4; mutant
        1. region d:122-287 [148417] picpiclink
      5. 1jkj picpicxrefxrefxref
        complexed with coa, gol, po4, so4
        1. region a:122-287 [66801] picpiclink
        2. region d:122-287 [66805] picpiclink
      6. 2nu6 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region a:122-287 [148397] picpiclink
      7. 2nu6 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region d:122-287 [148401] picpiclink
      8. 1cqj picpicxrefxrefxref
        1. region a:122-286 [31133] picpiclink
        2. region d:122-286 [31134] picpiclink
      9. 2scu picpicxrefxrefxref
        complexed with coa, so4
        1. region a:122-286 [31131] picpiclink
        2. region d:122-286 [31132] picpiclink
      10. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region a:122-286 [148421] picpiclink
      11. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region d:122-286 [148425] picpiclink
      12. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region f:122-286 [148429] picpiclink
      13. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        1. region h:122-286 [148433] picpiclink
      14. 1jll picpicxrefxrefxref
        complexed with coa, po4, so4; mutant
        1. region a:122-287 [66852] picpiclink
        2. region d:122-287 [66856] picpiclink
      15. 2nua picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        1. region a:122-287 [148437] picpiclink
      16. 2nua picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        1. region d:122-287 [148441] picpiclink
      17. 1cqi picpicxrefxrefxref
        1. region a:122-286 [31137] picpiclink
        2. region d:122-286 [31138] picpiclink
      18. 1scu picpicxrefxrefxref
        complexed with coa, phs
        1. region a:122-288 [31135] picpiclink
        2. region d:122-288 [31136] picpiclink
    2. Thermus thermophilus [TaxId: 274] [89589] (1)
      1. 1oi7 picpicxref
        alpha-chain only
        mutant
        1. region a:122-288 [87050] picpiclink
    3. Pig (Sus scrofa) [TaxId: 9823] [52214] (6)
      1. 1euc picpicxrefxrefxref
        complexed with po4, so4, zn; mutant
        1. region a:131-306 [31139] picpiclink
      2. 1eud picpicxrefxrefxref
        complexed with so4; mutant
        1. region a:131-306 [31140] picpiclink
      3. 2fp4 picpicxrefxrefxref
        automatically matched to d1euca2
        complexed with gtp, k, mg
        1. region a:131-306 [133896] picpiclink
      4. 2fpp picpicxrefxrefxref
        automatically matched to d1euca2
        complexed with cl, so4
        1. region a:131-306 [133916] picpiclink
      5. 2fpg picpicxrefxrefxref
        automatically matched to d1euca2
        complexed with gdp, k, po4
        1. region a:131-306 [133901] picpiclink
      6. 2fpi picpicxrefxrefxref
        automatically matched to d1euca2
        complexed with so4
        1. region a:131-306 [133905] picpiclink
  2. Succinyl-CoA synthetase, beta-chain, C-terminal domain [52215]
    1. Escherichia coli [TaxId: 562] [52216] (18)
      1. 2nu7 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        1. region b:239-388 [148406] picpiclink
      2. 2nu7 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        1. region e:239-385 [148410] picpiclink
      3. 2nu8 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, gol, po4, so4; mutant
        1. region b:239-388 [148414] picpiclink
      4. 2nu8 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, gol, po4, so4; mutant
        1. region e:239-385 [148418] picpiclink
      5. 1jkj picpicxrefxrefxref
        complexed with coa, gol, po4, so4
        1. region b:239-388 [66802] picpiclink
        2. region e:239-385 [66806] picpiclink
      6. 2nu6 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region b:239-388 [148398] picpiclink
      7. 2nu6 picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region e:239-385 [148402] picpiclink
      8. 1cqj picpicxrefxrefxref
        1. region b:239-385 [31143] picpiclink
        2. region e:239-385 [31144] picpiclink
      9. 2scu picpicxrefxrefxref
        complexed with coa, so4
        1. region b:239-385 [31141] picpiclink
        2. region e:239-385 [31142] picpiclink
      10. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region b:239-385 [148422] picpiclink
      11. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region e:239-385 [148426] picpiclink
      12. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region g:239-385 [148430] picpiclink
      13. 2nu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        1. region i:239-385 [148434] picpiclink
      14. 1jll picpicxrefxrefxref
        complexed with coa, po4, so4; mutant
        1. region b:239-388 [66853] picpiclink
        2. region e:239-385 [66857] picpiclink
      15. 2nua picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        1. region b:239-388 [148438] picpiclink
      16. 2nua picpicxrefxrefxrefxrefxrefxref
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        1. region e:239-385 [148442] picpiclink
      17. 1cqi picpicxrefxrefxref
        1. region b:239-385 [31147] picpiclink
        2. region e:239-385 [31148] picpiclink
      18. 1scu picpicxrefxrefxref
        complexed with coa, phs
        1. region b:239-388 [31145] picpiclink
        2. region e:239-388 [31146] picpiclink
    2. Pig (Sus scrofa) [TaxId: 9823] [52217] (6)
      1. 1euc picpicxrefxrefxref
        complexed with po4, so4, zn; mutant
        1. region b:246-393 [31149] picpiclink
      2. 1eud picpicxrefxrefxref
        complexed with so4; mutant
        1. region b:246-394 [31150] picpiclink
      3. 2fp4 picpicxrefxrefxref
        automatically matched to d1eudb1
        complexed with gtp, k, mg
        1. region b:246-393 [133897] picpiclink
      4. 2fpp picpicxrefxrefxref
        automatically matched to d1eudb1
        complexed with cl, so4
        1. region b:246-393 [133917] picpiclink
      5. 2fpg picpicxrefxrefxref
        automatically matched to d1eudb1
        complexed with gdp, k, po4
        1. region b:246-393 [133902] picpiclink
      6. 2fpi picpicxrefxrefxref
        automatically matched to d1eudb1
        complexed with so4
        1. region b:246-393 [133906] picpiclink
  3. Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 [142043]
    duplication: tandem repeat of two similar domains, structurally and functionally related to the C-terminal domains of Succinyl-CoA synthetase subunits; the first domain (2) is related to the alpha-chain domain, whereas the second domain (3) is related to the beta-chain domain
    1. Pyrococcus horikoshii [TaxId: 53953] [142044] (4)
      SQ O58493 130-290! SQ O58493 291-453
      PH0766
      1. 2csu picpicxrefxref
        1. region a:130-290 [130782] picpiclink
      2. 2csu picpicxrefxref
        1. region a:291-453 [130783] picpiclink
      3. 2csu picpicxrefxref
        automatically matched to 2CSU A:130-290
        1. region b:130-290 [130785] picpiclink
      4. 2csu picpicxrefxref
        automatically matched to 2CSU A:291-453
        1. region b:291-453 [130786] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk