Structural Classification of Proteins
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Fold: Cryptochrome/photolyase, N-terminal domain

3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Cryptochrome/photolyase, N-terminal domain [52424]
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

Superfamilies:

  1. Cryptochrome/photolyase, N-terminal domain [52425] (1)
    link to SUPERFAMILY database - Superfamily
    1. Cryptochrome/photolyase, N-terminal domain [52426] (5)
      1. DNA photolyase [52427]
        binds a light-harvesting cofactor
        1. Escherichia coli [TaxId: 562] [52428] (1)
          cofactor is MHTF
          1. 1dnp picpicxref
            complexed with fad, mhf
            1. region a:1-200 [31630] picpiclink
            2. region b:1-200 [31631] picpiclink
        2. Thermus thermophilus [TaxId: 274] [69460] (5)
          1. 2j07 picpicxref
            automatically matched to d1iqra2
            complexed with cl, fad, hdf, po4
            1. region a:2-171 [137892] picpiclink
          2. 2j09 picpicxref
            automatically matched to d1iqra2
            complexed with cl, fad, fmn, po4
            1. region a:2-171 [137896] picpiclink
          3. 1iqr picpicxref
            complexed with fad, po4
            1. region a:2-171 [66276] picpiclink
          4. 1iqu picpicxref
            complexed with thymine
            complexed with fad, po4, tdr
            1. region a:2-171 [71281] picpiclink
          5. 2j08 picpicxref
            automatically matched to d1iqra2
            complexed with cl, fad, irf, po4
            1. region a:2-171 [137894] picpiclink
        3. Synechococcus elongatus [TaxId: 32046] [52429] (7)
          SQ P05327 1-474
          cofactor is HDF
          1. 1owl picpicxref
            complexed with fad, po4
            1. region a:3-204 [93648] picpiclink
          2. 1tez picpicxref
            complexed with fad, hdf, mg, tcp
            1. region a:2-204 [112410] picpiclink
            2. region b:2-204 [112412] picpiclink
            3. region c:2-204 [112414] picpiclink
            4. region d:2-204 [112416] picpiclink
          3. 1qnf picpicxref
            complexed with fad, hdf
            1. region a:1-204 [31632] picpiclink
          4. 1owp picpicxref
            complexed with fad, po4
            1. region a:2-204 [93656] picpiclink
          5. 1own picpicxref
            complexed with fad, po4
            1. region a:2-204 [93652] picpiclink
          6. 1owo picpicxref
            complexed with fad, po4
            1. region a:2-204 [93654] picpiclink
          7. 1owm picpicxref
            complexed with fad, po4
            1. region a:2-204 [93650] picpiclink
      2. Cryptochrome [82367]
        1. Synechocystis sp., pcc 6803 [TaxId: 1143] [82368] (1)
          1. 1np7 picpicxref
            complexed with fad, so4
            1. region a:1-204 [80678] picpiclink
            2. region b:1-204 [80680] picpiclink
        2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [110496] (2)
          SQ Q43125 13-497
          1. 1u3d picpicxref
            complexed with anp, cl, fad, mg, nds
            1. region a:13-197 [107639] picpiclink
          2. 1u3c picpicxref
            complexed with cl, fad, hez, mg, nds
            1. region a:13-197 [107637] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk