Family: PurP N-terminal domain-like

Pfam 06849; DUF1246

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: PreATP-grasp domain [52439]
   3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
   possible rudiment form of Rossmann-fold domain
4. Superfamily: PreATP-grasp domain [52440]
   precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
   uperfamily
5. Family: PurP N-terminal domain-like [159526]
   Pfam 06849; DUF1246

Protein Domains:

1. 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP [159527]
   1. Pyrococcus furiosus [TaxId: 2261] [159528] (12)
      SQ Q8U0R7 1-99
      1. 2r85
         automatically matched to 2R84 A:1-99
         complexed with amp, cl, mpd, na
         1. region a:1-99 [151676]
      2. 2r85
         automatically matched to 2R84 A:1-99
         complexed with amp, cl, mpd, na
         1. region b:1-99 [151678]
      3. 2r84
         complexed with amp, amz, cl, mpd, na
         1. region a:1-99 [151672]
      4. 2r84
         automatically matched to 2R84 A:1-99
         complexed with amp, amz, cl, mpd, na
         1. region b:1-99 [151674]
      5. 2r87
         automatically matched to 2R84 A:1-99
         complexed with adp, po4
         1. region a:1-99 [151684]
      6. 2r87
         automatically matched to 2R84 A:1-99
         complexed with adp, po4
         1. region b:1-99 [151686]
      7. 2r87
         automatically matched to 2R84 A:1-99
         complexed with adp, po4
         1. region c:1-99 [151688]
      8. 2r87
         automatically matched to 2R84 A:1-99
         complexed with adp, po4
         1. region d:1-99 [151690]
      9. 2r87
         automatically matched to 2R84 A:1-99
         complexed with adp, po4
         1. region e:1-99 [151692]
      10. 2r87
          automatically matched to 2R84 A:1-99
          complexed with adp, po4
          1. region f:1-99 [151694]
      11. 2r86
          automatically matched to 2R84 A:1-99
          complexed with atp, mpd, na, po4
          1. region a:1-99 [151680]
      12. 2r86
          automatically matched to 2R84 A:1-99
          complexed with atp, mpd, na, po4
          1. region b:1-99 [151682]
   2. Thermococcus kodakaraensis [TaxId: 311400] [159529] (3)
      SQ Q5JD28 2-97
      1. 2pbz
         complexed with atp
         1. region a:4-99 [149371]
      2. 2pbz
         automatically matched to 2PBZ A:4-99
         complexed with atp
         1. region b:4-99 [149373]
      3. 2pbz
         automatically matched to 2PBZ A:4-99
         complexed with atp
         1. region c:4-99 [149375]
   3. Methanocaldococcus jannaschii [TaxId: 2190] [159530] (4)
      SQ Q57600 1-123
      1. 2r7k
         complexed with acp, amz, cl, so4
         1. region a:1-123 [151647]
      2. 2r7l
         automatically matched to 2R7K A:1-123
         complexed with amz, atp, cl, so4
         1. region a:1-123 [151649]
      3. 2r7m
         automatically matched to 2R7K A:1-123
         complexed with amp, cl, so4
         1. region a:1-123 [151651]
      4. 2r7n
         automatically matched to 2R7K A:1-123
         complexed with adp, cl, fai, so4
         1. region a:1-123 [151653]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk