Structural Classification of Proteins
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Fold: Nucleotide-binding domain

3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Nucleotide-binding domain [51970]
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

Superfamilies:

  1. Nucleotide-binding domain [51971] (3)
    this superfamily shares the common nucleotide-binding site with and provides a link between the Rossmann-fold NAD(P)-binding and FAD/NAD(P)-binding domains
    link to SUPERFAMILY database - Superfamily
    1. N-terminal domain of adrenodoxin reductase-like [51972] (5)
      1. Trimethylamine dehydrogenase, middle domain [51973]
        1. Methylophilus methylotrophus, w3a1 [TaxId: 17] [51974] (5) picpic
      2. 2,4-dienoyl-CoA reductase, middle domain [102187]
        1. Escherichia coli [TaxId: 562] [102188] (1) picpic
      3. Adrenodoxin reductase of mitochondrial p450 systems [51975]
        1. Cow (Bos taurus) [TaxId: 9913] [51976] (6) picpic
      4. Ferredoxin:NADP reductase FprA [75129]
        1. Mycobacterium tuberculosis [TaxId: 1773] [75130] (2) picpic
      5. Dihydropyrimidine dehydrogenase, domain 2 [51977]
        1. Pig (Sus scrofa) [TaxId: 9823] [51978] (5) picpic
    2. D-aminoacid oxidase, N-terminal domain [51979] (2)
      This family is probably related to the FAD-linked reductases and shares with them the C-terminal domain fold
      1. D-aminoacid oxidase, N-terminal domain [51980]
        1. Pig (Sus scrofa) [TaxId: 9823] [51981] (6) picpic
        2. Rhodotorula gracilis [TaxId: 5286] [51982] (4) picpic
    3. UDP-galactopyranose mutase, N-terminal domain [69427] (2)
      domain structure is similar to that of D-aminoacid oxidase
      1. UDP-galactopyranose mutase, N-terminal domain [69428]
        1. Escherichia coli [TaxId: 562] [69429] (1) picpic
        2. Klebsiella pneumoniae [TaxId: 573] [117446] (3) picpic
          SQ Q48485
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk