Structural Classification of Proteins

Superfamily: Tubulin nucleotide-binding domain-like

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: Tubulin nucleotide-binding domain-like [52489]
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
Superfamily: Tubulin nucleotide-binding domain-like [52490]
uperfamily

Families:

Tubulin, GTPase domain [52491] (9)
1. Cell-division protein FtsZ [52492]
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [52493] (7)
    SQ Q57816 23-360
    1. 2vap
      automatically matched to d1fsza1
      complexed with gdp
      1. region a:23-231 [152828]
    2. 1w5b
      complexed with gtp
      1. region a:23-231 [114211]
      2. region b:23-231 [114213]
    3. 1w5a
      complexed with gtp, mg
      1. region a:23-231 [114207]
      2. region b:23-231 [114209]
    4. 1w58
      complexed with g2p, mg
      1. region 1:23-231 [114201]
    5. 1w59
      complexed with so4
      1. region a:23-231 [114203]
      2. region b:23-231 [114205]
    6. 1fsz
      complexed with gdp
      1. region a:23-231 [31750]
    7. 1w5e
      complexed with gtp; mutant
      1. region a:23-231 [114229]
      2. region b:23-231 [114231]
      3. region c:23-231 [114233]
      4. region d:23-231 [114235]
      5. region e:23-231 [114237]
      6. region f:23-231 [114239]
      7. region g:23-231 [114241]
      8. region h:23-231 [114243]
      9. region i:23-231 [114245]
  2. Pseudomonas aeruginosa [TaxId: 287] [89639] (2)
    1. 1ofu
      complexed with SulA homologue PA3008
      complexed with gdp
      1. region a:11-208 [86972]
      2. region b:11-208 [86974]
    2. 2vaw
      automatically matched to d1ofua1
      complexed with gdp
      1. region a:11-208 [152856]
  3. Mycobacterium tuberculosis [TaxId: 1773] [110501] (7)
    SQ O08378
    1. 1rq2
      complexed with cit
      1. region a:8-205 [105048]
      2. region b:8-205 [105050]
    2. 1rlu
      complexed with gol, gsp
      1. region a:8-205 [104984]
      2. region b:8-205 [104986]
    3. 2q1y
      automatically matched to d1rlua1
      complexed with gsp
      1. region a:8-205 [150004]
    4. 2q1y
      automatically matched to d1rlua1
      complexed with gsp
      1. region b:8-205 [150006]
    5. 2q1x
      automatically matched to d1rlua1
      complexed with cit
      1. region a:8-205 [150000]
    6. 2q1x
      automatically matched to d1rlua1
      complexed with cit
      1. region b:8-205 [150002]
    7. 1rq7
      complexed with gdp
      1. region a:8-205 [105052]
      2. region b:8-205 [105054]
  4. Thermotoga maritima [TaxId: 2336] [117498] (1)
    SQ O08398 22-335
    1. 1w5f
      complexed with g2p, mg; mutant
      1. region a:22-215 [114247]
      2. region b:22-215 [114249]
2. Tubulin alpha-subunit [52494]
  1. Pig (Sus scrofa) [TaxId: 9823] [52495] (3)
    1. 1tub
      complexed with gdp, gtp, txl
      1. region a:1-245 [31751]
    2. 2hxf
      automatically matched to d1tuba1
      complexed with anp, gdp, gtp, mg, ta1; mutant
      1. region a:2-245 [136838]
    3. 2hxh
      automatically matched to d1tuba1
      complexed with adp, gdp, gtp, mg, ta1; mutant
      1. region a:2-245 [136849]
  2. Cow (Bos taurus) [TaxId: 9913] [63989] (5)
    1. 1jff
      complexed with gdp, gtp, mg, ta1, zn
      1. region a:2-245 [62932]
    2. 1sa0
      complexed with cn2, gdp, gtp, mg
      1. region a:2-245 [98769]
      2. region c:2-245 [98773]
    3. 1z2b
      complexed with cn2, gdp, gtp, mg, vlb
      1. region a:2-245 [144725]
    4. 1z2b
      automatically matched to 1Z2B A:2-245
      complexed with cn2, gdp, gtp, mg, vlb
      1. region c:2-245 [144729]
    5. 1sa1
      complexed with gdp, gtp, mg, pod
      1. region a:2-245 [98778]
      2. region c:2-245 [98782]
  3. Prosthecobacter dejongeii [TaxId: 48465] [159531] (3)
    SQ Q8GCC5 3-246
    bacterial tubulin BtubA
    1. 2bto
      complexed with gtp
      1. region a:3-246 [145009]
    2. 2bto
      automatically matched to 2BTO A:3-246
      complexed with gtp
      1. region b:3-246 [145011]
    3. 2btq
      automatically matched to 2BTO A:3-246
      complexed with gdp, so4
      1. region a:3-246 [146216]
3. Tubulin beta-subunit [52496]
  1. Pig (Sus scrofa) [TaxId: 9823] [52497] (1)
    1. 1tub
      complexed with gdp, gtp, txl
      1. region b:1-245 [31752]
  2. Cow (Bos taurus) [TaxId: 9913] [63990] (9)
    SQ P02550 ! SQ P02554
    1. 1jff
      complexed with gdp, gtp, mg, ta1, zn
      1. region b:2-245 [62934]
    2. 1sa0
      complexed with cn2, gdp, gtp, mg
      1. region b:2-245 [98771]
      2. region d:2-245 [98775]
    3. 1tvk
      complexed with ep, gdp, gtp
      1. region b:2-245 [107364]
    4. 1tvk
      complexed with ep, gdp, gtp
      1. region a:2-245 [107362]
    5. 1z2b
      complexed with cn2, gdp, gtp, mg, vlb
      1. region b:2-245 [144727]
    6. 1z2b
      automatically matched to 1Z2B B:2-245
      complexed with cn2, gdp, gtp, mg, vlb
      1. region d:2-245 [144731]
    7. 1sa1
      complexed with gdp, gtp, mg, pod
      1. region b:2-245 [98780]
      2. region d:2-245 [98784]
    8. 2hxf
      automatically matched to d1tvkb1
      complexed with anp, gdp, gtp, mg, ta1; mutant
      1. region b:2-246 [136840]
    9. 2hxh
      automatically matched to d1tvkb1
      complexed with adp, gdp, gtp, mg, ta1; mutant
      1. region b:2-246 [136851]