Structural Classification of Proteins
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Family: CoA transferase beta subunit-like

catalytic subunit: similar active site structure to the NagB and RpiA families; mixed beta-sheet of 7 strands, order 4321567; strand 3 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NagB/RpiA/CoA transferase-like [100949]
    core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456
  4. Superfamily: NagB/RpiA/CoA transferase-like [100950]
    link to SUPERFAMILY database - Superfamily
  5. Family: CoA transferase beta subunit-like [74657]
    catalytic subunit: similar active site structure to the NagB and RpiA families; mixed beta-sheet of 7 strands, order 4321567; strand 3 is antiparallel to the rest

Protein Domains:

  1. Glutaconate:CoA transferase beta [53320]
    1. Acidaminococcus fermentans [TaxId: 905] [53321] (1)
      1. 1poi picpicxref
        complexed with cu
        1. chain b [34155] picpiclink
        2. chain d [34156] picpiclink
  2. Succinate:CoA transferase, C-terminal domain [82466]
    1. Pig (Sus scrofa) [TaxId: 9823] [82467] (13)
      1. 1ooy picpicxref
        complexed with k, po4
        1. region a:261-481 [93388] picpiclink
        2. region b:262-481 [93390] picpiclink
      2. 1ooz picpicxref
        complexed with k; mutant
        1. region a:260-481 [93392] picpiclink
        2. region b:260-481 [93394] picpiclink
      3. 2nrc picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        mutant
        1. region a:261-480 [148370] picpiclink
      4. 2nrc picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        mutant
        1. region b:261-480 [148372] picpiclink
      5. 2nrc picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        mutant
        1. region c:261-480 [148374] picpiclink
      6. 2nrc picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        mutant
        1. region d:261-480 [148376] picpiclink
      7. 2nrb picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        complexed with cl; mutant
        1. region a:261-480 [148362] picpiclink
      8. 2nrb picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        complexed with cl; mutant
        1. region b:261-480 [148364] picpiclink
      9. 2nrb picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        complexed with cl; mutant
        1. region c:261-480 [148366] picpiclink
      10. 2nrb picpicxrefxrefxrefxref
        automatically matched to d1m3eb2
        complexed with cl; mutant
        1. region d:261-480 [148368] picpiclink
      11. 1ope picpicxref
        complexed with hg, k; mutant
        1. region a:262-481 [93400] picpiclink
        2. region b:262-481 [93402] picpiclink
      12. 1o9l picpicxref
        complexed with emc, emt
        1. region a:300-520 [81242] picpiclink
        2. region b:300-520 [81244] picpiclink
        3. region c:300-520 [81246] picpiclink
        4. region d:300-520 [81248] picpiclink
      13. 1m3e picpicxref
        complexed with mse
        1. region a:260-481 [78558] picpiclink
        2. region b:259-481 [78560] picpiclink
        3. region c:259-481 [78562] picpiclink
        4. region d:260-481 [78564] picpiclink
  3. Putative enzyme YdiF C-terminal domain [142194]
    1. Escherichia coli [TaxId: 562] [142195] (12)
      SQ P37766 283-529
      1. 2ahu picpicxrefxrefxrefxref
        1. region a:283-529 [126785] picpiclink
      2. 2ahu picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        1. region b:283-529 [126787] picpiclink
      3. 2ahu picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        1. region c:283-529 [126789] picpiclink
      4. 2ahu picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        1. region d:283-529 [126791] picpiclink
      5. 2ahv picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region a:284-529 [126793] picpiclink
      6. 2ahv picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region b:284-529 [126795] picpiclink
      7. 2ahv picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region c:284-529 [126797] picpiclink
      8. 2ahv picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region d:284-529 [126799] picpiclink
      9. 2ahw picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region a:284-529 [126801] picpiclink
      10. 2ahw picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region b:284-529 [126803] picpiclink
      11. 2ahw picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region c:284-529 [126805] picpiclink
      12. 2ahw picpicxrefxrefxrefxref
        automatically matched to 2AHU A:283-529
        complexed with coa
        1. region d:284-529 [126807] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk