Structural Classification of Proteins
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Family: IF2B-like

Pfam 01008; contains extra N-terminal alpha+beta domain (1-126); beta(3)-alpha(5); 3 layers: b/a/a

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NagB/RpiA/CoA transferase-like [100949]
    core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456
  4. Superfamily: NagB/RpiA/CoA transferase-like [100950]
    link to SUPERFAMILY database - Superfamily
  5. Family: IF2B-like [110513]
    Pfam 01008; contains extra N-terminal alpha+beta domain (1-126); beta(3)-alpha(5); 3 layers: b/a/a

Protein Domains:

  1. Probable methylthioribose-1-phosphate isomerase TM0911 [110514]
    1. Thermotoga maritima [TaxId: 2336] [110515] (1)
      SQ Q9X013
      1. 1t9k picpic
        Structural genomics target
        complexed with cl, so4
        1. chain a [106721] picpiclink
        2. chain b [106722] picpiclink
        3. chain c [106723] picpiclink
        4. chain d [106724] picpiclink
  2. Putative methylthioribose-1-phosphate isomerase Ypr118W [110516]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110517] (1)
      SQ Q06489
      1. 1w2w picpic
        complexed with so4
        1. chain a,b [109130] picpiclink
        2. chain e,f [109131] picpiclink
        3. chain i,j [109132] picpiclink
        4. chain m,n [109133] picpiclink
  3. Putative eIF-2B delta-subunit [110518]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [110519] (1)
      SQ O29877 # AF0370
      1. 1t5o picpic
        1. chain a [106459] picpiclink
        2. chain b [106460] picpiclink
        3. chain c [106461] picpiclink
        4. chain d [106462] picpiclink
  4. Putative eIF-2B subunit 2-like protein PH0440 [117517]
    1. Pyrococcus horikoshii [TaxId: 53953] [117518] (1)
      SQ O58185
      1. 1vb5 picpic
        1. chain a [113604] picpiclink
        2. chain b [113605] picpiclink
  5. Initiation factor 2b [159543]
    1. Leishmania major [TaxId: 5664] [159544] (2)
      SQ Q4Q0R9 133-506,133-506
      1. 2a0u picpic
        complexed with so4
        1. region a:10-383 [146036] picpiclink
      2. 2a0u picpic
        automatically matched to 2A0U A:10-383
        complexed with so4
        1. region b:17-383 [146037] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk