Structural Classification of Proteins
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Fold: MCP/YpsA-like

3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: MCP/YpsA-like [102404]
    3 layers: a/b/a, parallel beta-sheet of 7 strands, order 4321567

Superfamilies:

  1. MCP/YpsA-like [102405] (2)
    link to SUPERFAMILY database - Superfamily
    1. MoCo carrier protein-like [102406] (6)
      Pfam 03641
      1. Hypothetical protein TM1055 [102407]
        1. Thermotoga maritima [TaxId: 2336] [102408] (1) picpic
          structural genomics; NESG target VT76
      2. Hypothetical protein YvdD [102409]
        1. Bacillus subtilis [TaxId: 1423] [102410] (1) picpic
      3. Hypothetical protein TT1887 (TTHA0294) [117563]
        1. Thermus thermophilus [TaxId: 274] [117564] (1) picpic
          SQ Q5SLJ9
      4. Hypothetical protein TT1465 (TTHA1644) [117565]
        1. Thermus thermophilus [TaxId: 274] [117566] (1) picpic
          SQ Q5SHT6
      5. Hypothetical protein At5g11950 [117567]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117568] (3) picpic
          SQ Q84MC2
      6. Hypothetical protein At2g37210/T2N18.3 [142344]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [142345] (4) picpic
          SQ Q8L8B8 8-190
    2. YpsA-like [159579] (1)
      Pfam 06908; DUF1273; lacking the last strand 7; different set of conserved residues in the putative active site than in the MoCo carrier protein-like family
      1. Hypothetical protein YpsA [159580]
        1. Bacillus subtilis [TaxId: 1423] [159581] (1) picpic
          SQ P50838 1-177
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk