Structural Classification of Proteins
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Superfamily: PHP domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: 7-stranded beta/alpha barrel [51988]
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. Superfamily: PHP domain-like [89550]
    link to SUPERFAMILY database - Superfamily

Families:

  1. PHP domain [89551] (2)
    putative phosphoesterase domain; contains trinuclear metal-binding site; some similarity to the metallohydrolases of TIM-barrel fold
    1. Hypothetical protein YcdX [89552]
      1. Escherichia coli [TaxId: 562] [89553] (3)
        SQ P75914
        1. 1m65 picpic
          structural genomics
          complexed with na, so4, zn
          1. chain a [84847] picpiclink
        2. 1pb0 picpic
          Structural genomics target
          complexed with fmt, so4, zn
          1. chain a [104099] picpiclink
          2. chain b [104100] picpiclink
          3. chain c [104101] picpiclink
        3. 1m68 picpic
          structural genomics
          complexed with so4, zn
          1. chain a [84848] picpiclink
    2. Hypothetical protein TM0559 [141949]
      1. Thermotoga maritima [TaxId: 2336] [141950] (6)
        SQ Q9WZ29 5-233
        1. 2anu picpic
          complexed with cl, zn
          1. region a:5-233 [127058] picpiclink
        2. 2anu picpic
          automatically matched to 2ANU A:5-233
          complexed with cl, zn
          1. region b:5-233 [127059] picpiclink
        3. 2anu picpic
          automatically matched to 2ANU A:5-233
          complexed with cl, zn
          1. region c:5-232 [127060] picpiclink
        4. 2anu picpic
          automatically matched to 2ANU A:5-233
          complexed with cl, zn
          1. region d:5-232 [127061] picpiclink
        5. 2anu picpic
          automatically matched to 2ANU A:5-233
          complexed with cl, zn
          1. region e:5-232 [127062] picpiclink
        6. 2anu picpic
          automatically matched to 2ANU A:5-233
          complexed with cl, zn
          1. region f:5-233 [127063] picpiclink
  2. RNase P subunit p30 [110442] (1)
    Pfam 01876
    1. Ribonuclease P protein component 3, Rnp3 [110443]
      1. Pyrococcus horikoshii [TaxId: 53953] [110444] (3)
        SQ O59543 # PH1877
        1. 1v77 picpic
          1. chain a [108402] picpiclink
        2. 2czv picpicxrefxref
          automatically matched to d1v77a_
          complexed with acy, bog; mutant
          1. region a:7-208 [131056] picpiclink
        3. 2czv picpicxrefxref
          automatically matched to d1v77a_
          complexed with acy, bog; mutant
          1. region b:7-208 [131057] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk