Structural Classification of Proteins

Superfamily: Arginase/deacetylase

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: Arginase/deacetylase [52767]
3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
Superfamily: Arginase/deacetylase [52768]
uperfamily

Families:

Arginase-like amidino hydrolases [52769] (8)
Pfam 00491
1. Arginase [52770]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [52771] (51)
    SQ P07824
    1. 1d3v
      1. chain a [32559]
      2. chain b [32560]
    2. 1zpe
      complexed with bbc, mn; mutant
      1. region a:6-319 [125459]
    3. 1zpe
      automatically matched to 1ZPE A:6-319
      complexed with bbc, mn; mutant
      1. region b:6-319 [125460]
    4. 1zpe
      automatically matched to 1ZPE A:6-319
      complexed with bbc, mn; mutant
      1. region c:6-319 [125461]
    5. 1zpg
      automatically matched to 1ZPE A:6-319
      complexed with bpe, mn; mutant
      1. region a:6-319 [125462]
    6. 1zpg
      automatically matched to 1ZPE A:6-319
      complexed with bpe, mn; mutant
      1. region b:6-319 [125463]
    7. 1zpg
      automatically matched to 1ZPE A:6-319
      complexed with bpe, mn; mutant
      1. region c:6-319 [125464]
    8. 1hqg
      complexed with mn, orn, ure; mutant
      1. chain a [61136]
      2. chain b [61137]
      3. chain c [61138]
    9. 1rla
      complexed with mn
      1. chain a [32561]
      2. chain b [32562]
      3. chain c [32563]
    10. 1hq5
      complexed with mn, s2c
      1. chain a [61123]
      2. chain b [61124]
    11. 1p8r
      complexed with cl, mn, s2c; mutant
      1. chain a [87977]
      2. chain b [87978]
    12. 1t5f
      complexed with dhh, mn
      1. region a:6-319 [119154]
    13. 1t5f
      automatically matched to 1T5F A:6-319
      complexed with dhh, mn
      1. region b:6-319 [119155]
    14. 1t5f
      automatically matched to 1T5F A:6-319
      complexed with dhh, mn
      1. region c:6-319 [119156]
    15. 1ta1
      automatically matched to d1hqga_
      complexed with gol, mn; mutant
      1. region a:6-319 [119201]
    16. 1ta1
      automatically matched to d1hqga_
      complexed with gol, mn; mutant
      1. region b:6-319 [119202]
    17. 1ta1
      automatically matched to d1hqga_
      complexed with gol, mn; mutant
      1. region c:6-319 [119203]
    18. 1t4t
      automatically matched to d1hqfa_
      complexed with dir, mn
      1. region a:6-319 [119151]
    19. 1t4t
      automatically matched to d1hqfa_
      complexed with dir, mn
      1. region b:6-319 [119152]
    20. 1t4t
      automatically matched to d1hqfa_
      complexed with dir, mn
      1. region c:6-319 [119153]
    21. 1t5g
      complexed with arg, f, mn
      1. chain a [112254]
      2. chain b [112255]
      3. chain c [112256]
    22. 3rla
      complexed with mn; mutant
      1. chain a [32564]
      2. chain b [32565]
      3. chain c [32566]
    23. 1p8p
      complexed with mn; mutant
      1. chain a [87971]
      2. chain b [87972]
      3. chain c [87973]
    24. 4rla
      complexed with mn; mutant
      1. chain a [32567]
      2. chain b [32568]
      3. chain c [32569]
    25. 5rla
      complexed with mn; mutant
      1. chain a [32570]
      2. chain b [32571]
      3. chain c [32572]
    26. 1t4r
      automatically matched to d1hqfa_
      complexed with ahi, mn
      1. region a:6-319 [119148]
    27. 1t4r
      automatically matched to d1hqfa_
      complexed with ahi, mn
      1. region b:6-319 [119149]
    28. 1t4r
      automatically matched to d1hqfa_
      complexed with ahi, mn
      1. region c:6-319 [119150]
    29. 1t4p
      automatically matched to d1hqfa_
      complexed with 2bh, mn
      1. region a:6-319 [119145]
    30. 1t4p
      automatically matched to d1hqfa_
      complexed with 2bh, mn
      1. region b:6-319 [119146]
    31. 1t4p
      automatically matched to d1hqfa_
      complexed with 2bh, mn
      1. region c:6-319 [119147]
    32. 1r1o
      complexed with mn, sdc
      1. chain a [96830]
      2. chain b [96831]
      3. chain c [96832]
    33. 1t4s
      complexed with mn, val
      1. chain a [112245]
      2. chain b [112246]
      3. chain c [112247]
    34. 1tbj
      complexed with gol, mn; mutant
      1. region a:6-319 [119216]
    35. 1tbh
      complexed with mn; mutant
      1. region a:6-319 [119213]
    36. 1tbh
      automatically matched to 1TBH A:6-319
      complexed with mn; mutant
      1. region b:6-319 [119214]
    37. 1tbh
      automatically matched to 1TBH A:6-319
      complexed with mn; mutant
      1. region c:6-319 [119215]
    38. 1tbj
      automatically matched to 1TBJ A:6-319
      complexed with gol, mn; mutant
      1. region b:6-319 [119217]
    39. 1tbj
      automatically matched to 1TBJ A:6-319
      complexed with gol, mn; mutant
      1. region c:6-319 [119218]
    40. 1p8q
      complexed with gol, mn; mutant
      1. chain a [87974]
      2. chain b [87975]
      3. chain c [87976]
    41. 1p8m
      complexed with mn; mutant
      1. chain a [87962]
      2. chain b [87963]
      3. chain c [87964]
    42. 1p8n
      complexed with gol, mn; mutant
      1. chain a [87965]
      2. chain b [87966]
      3. chain c [87967]
    43. 1p8o
      complexed with mn; mutant
      1. chain a [87968]
      2. chain b [87969]
      3. chain c [87970]
    44. 2rla
      complexed with mn
      1. chain a [32573]
      2. chain b [32574]
      3. chain c [32575]
    45. 1hqh
      complexed with mn, nnh
      1. chain a [61139]
      2. chain b [61140]
      3. chain c [61141]
    46. 1hqf
      complexed with mn
      1. chain a [61133]
      2. chain b [61134]
      3. chain c [61135]
    47. 1hqx
      complexed with mn; mutant
      1. chain a [61161]
      2. chain b [61162]
      3. chain c [61163]
    48. 1p8s
      complexed with mn; mutant
      1. chain a [87979]
      2. chain b [87980]
      3. chain c [87981]
    49. 1tbl
      complexed with mn; mutant
      1. region a:6-319 [119219]
    50. 1tbl
      automatically matched to 1TBL A:6-319
      complexed with mn; mutant
      1. region b:6-319 [119220]
    51. 1tbl
      automatically matched to 1TBL A:6-319
      complexed with mn; mutant
      1. region c:6-319 [119221]
  2. Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606] [102412] (1)
    1. 1pq3
      complexed with cl, mn, s2c, sul
      1. chain a [94989]
      2. chain b [94990]
      3. chain c [94991]
      4. chain d [94992]
      5. chain e [94993]
      6. chain f [94994]
  3. Bacillus caldovelox [TaxId: 33931] [52772] (5)
    1. 2cev
      complexed with gai, mn
      1. chain a [32576]
      2. chain b [32577]
      3. chain c [32578]
      4. chain d [32579]
      5. chain e [32580]
      6. chain f [32581]
    2. 3cev
      complexed with mn
      1. chain a [32582]
      2. chain b [32583]
      3. chain c [32584]
      4. chain d [32585]
      5. chain e [32586]
      6. chain f [32587]
    3. 1cev
      complexed with mn
      1. chain a [32588]
      2. chain b [32589]
      3. chain c [32590]
      4. chain d [32591]
      5. chain e [32592]
      6. chain f [32593]
    4. 5cev
      complexed with gai, mn
      1. chain a [32594]
      2. chain b [32595]
      3. chain c [32596]
      4. chain d [32597]
      5. chain e [32598]
      6. chain f [32599]
    5. 4cev
      complexed with gai, mn, orn
      1. chain a [32600]
      2. chain b [32601]
      3. chain c [32602]
      4. chain d [32603]
      5. chain e [32604]
      6. chain f [32605]
  4. Human (Homo sapiens) [TaxId: 9606] [142346] (16)
    SQ P05089 5-313
    1. 2aeb
      automatically matched to 1WVA A:5-313
      complexed with ab5, mn
      1. region a:5-313 [126617]
    2. 2aeb
      automatically matched to 1WVA A:5-313
      complexed with ab5, mn
      1. region b:5-313 [126618]
    3. 3dj8
      automatically matched to d1wvaa1
      complexed with exy, mn
      1. region a:6-313 [157753]
    4. 3dj8
      automatically matched to d1wvaa1
      complexed with exy, mn
      1. region b:6-313 [157754]
    5. 2pll
      automatically matched to d1wvaa1
      complexed with abh, mn
      1. region a:5-313 [149634]
    6. 2pll
      automatically matched to d1wvaa1
      complexed with abh, mn
      1. region b:5-313 [149635]
    7. 2zav
      automatically matched to d1wvaa1
      complexed with mn
      1. region a:6-313 [154292]
    8. 2zav
      automatically matched to d1wvaa1
      complexed with mn
      1. region b:6-312 [154293]
    9. 1wva
      complexed with mn, s2c
      1. region a:5-313 [121327]
    10. 1wva
      automatically matched to 1WVA A:5-313
      complexed with mn, s2c
      1. region b:5-313 [121328]
    11. 2pho
      automatically matched to 1WVA A:5-313
      complexed with mn, tsz
      1. region a:6-313 [139698]
    12. 2pho
      automatically matched to 1WVA A:5-313
      complexed with mn, tsz
      1. region b:6-313 [139699]
    13. 2pha
      automatically matched to 1WVA A:5-313
      complexed with mn
      1. region a:5-313 [139690]
    14. 2pha
      automatically matched to 1WVA A:5-313
      complexed with mn
      1. region b:5-313 [139691]
    15. 1wvb
      complexed with mn, s2c; mutant
      1. region a:5-313 [121329]
    16. 1wvb
      automatically matched to 1WVB A:5-313
      complexed with mn, s2c; mutant
      1. region b:5-313 [121330]
  5. Trypanosoma cruzi [TaxId: 5693] [142347] (1)
    SQ Q4DSA0 5-302
    1. 2a0m
      complexed with cl
      1. region a:13-310 [125960]
2. Proclavaminate amidino hydrolase [75227]
  1. Streptomyces clavuligerus [TaxId: 1901] [75228] (2)
    1. 1gq6
      complexed with mn
      1. chain a [70341]
      2. chain b [70342]
      3. chain c [70343]
    2. 1gq7
      complexed with mn2
      1. chain a [70344]
      2. chain b [70345]
      3. chain c [70346]
      4. chain d [70347]
      5. chain e [70348]
      6. chain f [70349]
3. Agmatinase [110585]
  1. Deinococcus radiodurans [TaxId: 1299] [110586] (3)
    SQ Q9RZ04 # DRA0149
    1. 1woh
      1. chain a [109446]
      2. chain b [109447]
      3. chain c [109448]
      4. chain d [109449]
      5. chain e [109450]
      6. chain f [109451]
    2. 1wog
      complexed with 16d, mn
      1. chain a [109440]
      2. chain b [109441]
      3. chain c [109442]
      4. chain d [109443]
      5. chain e [109444]
      6. chain f [109445]
    3. 1woi
      complexed with mn
      1. chain a [109452]
      2. chain b [109453]
      3. chain c [109454]
      4. chain d [109455]
      5. chain e [109456]
      6. chain f [109457]
4. Formimidoylglutamase HutG [117573]
  1. Vibrio cholerae [TaxId: 666] [117574] (1)
    SQ Q9KSQ2
    1. 1xfk
      1. chain a [115264]
Histone deacetylase, HDAC [52773] (3)
1. HDAC homologue [52774]
  1. Aquifex aeolicus [TaxId: 63363] [52775] (3)
    1. 1c3p
      1. chain a [32606]
    2. 1c3r
      complexed with tsn, zn; mutant
      1. chain a [32607]
      2. chain b [32608]
    3. 1c3s
      complexed with shh, zn; mutant
      1. chain a [32609]
2. Histone deacetylase 8, HDAC8 [110587]
  1. Human (Homo sapiens) [TaxId: 9606] [110588] (5)
    SQ Q9BY41 13-375 ! SQ Q9BY41
    1. 1t64
      complexed with ca, na, tsn, zn
      1. chain a [106543]
      2. chain b [106544]
    2. 1t67
      complexed with b3n, na, zn
      1. chain a [106553]
    3. 1vkg
      complexed with cri, na, zn
      1. chain a [108660]
      2. chain b [108661]
    4. 1w22
      complexed with k, nhb, zn
      1. chain a [109083]
      2. chain b [109084]
    5. 1t69
      complexed with shh, zn
      1. chain a [106554]
3. Histone deacetylase 7, HDAC7 [159582]
  HDAC7a
  1. Human (Homo sapiens) [TaxId: 9606] [159583] (9)
    SQ Q8WUI4 515-900
    1. 3c10
      automatically matched to 3C0Y A:515-900
      complexed with k, tsn, zn
      1. region a:515-900 [155847]
    2. 3c10
      automatically matched to 3C0Y A:515-900
      complexed with k, tsn, zn
      1. region b:516-900 [155848]
    3. 3c10
      automatically matched to 3C0Y A:515-900
      complexed with k, tsn, zn
      1. region c:519-899 [155849]
    4. 3c0z
      automatically matched to 3C0Y A:515-900
      complexed with k, shh, zn
      1. region a:515-900 [155844]
    5. 3c0z
      automatically matched to 3C0Y A:515-900
      complexed with k, shh, zn
      1. region b:516-900 [155845]
    6. 3c0z
      automatically matched to 3C0Y A:515-900
      complexed with k, shh, zn
      1. region c:519-899 [155846]
    7. 3c0y
      complexed with k, zn
      1. region a:515-900 [155841]
    8. 3c0y
      automatically matched to 3C0Y A:515-900
      complexed with k, zn
      1. region b:517-900 [155842]
    9. 3c0y
      automatically matched to 3C0Y A:515-900
      complexed with k, zn
      1. region c:519-899 [155843]