Structural Classification of Proteins
home mail help root up expand collapse

Family: Histone deacetylase, HDAC

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Arginase/deacetylase [52767]
    3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
  4. Superfamily: Arginase/deacetylase [52768]
    link to SUPERFAMILY database - Superfamily
  5. Family: Histone deacetylase, HDAC [52773]

Protein Domains:

  1. HDAC homologue [52774]
    1. Aquifex aeolicus [TaxId: 63363] [52775] (3)
      1. 1c3p picpic
        1. chain a [32606] picpiclink
      2. 1c3r picpic
        complexed with tsn, zn; mutant
        1. chain a [32607] picpiclink
        2. chain b [32608] picpiclink
      3. 1c3s picpic
        complexed with shh, zn; mutant
        1. chain a [32609] picpiclink
  2. Histone deacetylase 8, HDAC8 [110587]
    1. Human (Homo sapiens) [TaxId: 9606] [110588] (5)
      SQ Q9BY41 13-375 ! SQ Q9BY41
      1. 1t64 picpic
        complexed with ca, na, tsn, zn
        1. chain a [106543] picpiclink
        2. chain b [106544] picpiclink
      2. 1t67 picpic
        complexed with b3n, na, zn
        1. chain a [106553] picpiclink
      3. 1vkg picpic
        complexed with cri, na, zn
        1. chain a [108660] picpiclink
        2. chain b [108661] picpiclink
      4. 1w22 picpic
        complexed with k, nhb, zn
        1. chain a [109083] picpiclink
        2. chain b [109084] picpiclink
      5. 1t69 picpic
        complexed with shh, zn
        1. chain a [106554] picpiclink
  3. Histone deacetylase 7, HDAC7 [159582]
    HDAC7a
    1. Human (Homo sapiens) [TaxId: 9606] [159583] (9)
      SQ Q8WUI4 515-900
      1. 3c10 picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, tsn, zn
        1. region a:515-900 [155847] picpiclink
      2. 3c10 picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, tsn, zn
        1. region b:516-900 [155848] picpiclink
      3. 3c10 picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, tsn, zn
        1. region c:519-899 [155849] picpiclink
      4. 3c0z picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, shh, zn
        1. region a:515-900 [155844] picpiclink
      5. 3c0z picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, shh, zn
        1. region b:516-900 [155845] picpiclink
      6. 3c0z picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, shh, zn
        1. region c:519-899 [155846] picpiclink
      7. 3c0y picpic
        complexed with k, zn
        1. region a:515-900 [155841] picpiclink
      8. 3c0y picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, zn
        1. region b:517-900 [155842] picpiclink
      9. 3c0y picpic
        automatically matched to 3C0Y A:515-900
        complexed with k, zn
        1. region c:519-899 [155843] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk