Family: PDI-like

duplication: contains two tandem repeats of this fold

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Thioredoxin fold [52832]
   core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
4. Superfamily: Thioredoxin-like [52833]
   uperfamily
5. Family: PDI-like [52849]
   duplication: contains two tandem repeats of this fold

Protein Domains:

1. Protein disulfide isomerase, PDI [52850]
   1. Human (Homo sapiens) [TaxId: 9606] [52851] (3)
      1. 2bjx
         C-terminal domain
         1. chain a [32776]
      2. 1bjx
         C-terminal domain
         1. chain a [32774]
      3. 1mek
         N-terminal domain
         1. chain a [32775]
   2. Archaeon Pyrococcus furiosus [TaxId: 2261] [52852] (1)
      1. 1a8l
         complexed with zn
         1. region a:1-119 [32777]
         2. region a:120-226 [32778]
   3. Archaeon Pyrococcus horikoshii [TaxId: 53953] [89702] (1)
      glutaredoxin-like protein
      1. 1j08
         1. region a:2-119 [83855]
         2. region a:120-226 [83856]
         3. region b:2-119 [83857]
         4. region b:120-226 [83858]
         5. region c:2-119 [83859]
         6. region c:120-226 [83860]
         7. region d:2-119 [83861]
         8. region d:120-226 [83862]
         9. region e:2-119 [83863]
         10. region e:120-226 [83864]
         11. region f:2-119 [83865]
         12. region f:120-226 [83866]
         13. region g:2-119 [83867]
         14. region g:120-226 [83868]
         15. region h:2-119 [83869]
         16. region h:120-226 [83870]
   4. Fungi (Humicola insolens) [TaxId: 34413] [142357] (2)
      SQ P55059 227-355! SQ P55059 350-459
      1. 2djj
         domain A' only, corresponds to the 4th domain of yeast PDI (2B5E)
         1. region a:6-121 [131547]
      2. 2djk
         domain B' only, corresponds to the 3rd domain of yeast PDI (2B5E)
         1. region a:1-133 [131548]
   5. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [142358] (4)
      SQ P17967 142-239! SQ P17967 23-141! SQ P17967 240-364! SQ P17967 365-504
      1. 2b5e
         complexed with ba, gol
         1. region a:365-504 [127888]
      2. 2b5e
         complexed with ba, gol
         1. region a:142-239 [127889]
      3. 2b5e
         complexed with ba, gol
         1. region a:240-364 [127890]
      4. 2b5e
         complexed with ba, gol
         1. region a:23-141 [127891]
2. Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain [52853]
   1. Salmonella typhimurium [TaxId: 90371] [52854] (9)
      1. 1hyu
         complexed with cl, fad, so4
         1. region a:1-102 [32779]
         2. region a:103-198 [32780]
      2. 1zyp
         automatically matched to d1hyua3
         1. region a:1-102 [125842]
      3. 1zyp
         automatically matched to d1hyua4
         1. region a:103-196 [125843]
      4. 1zyp
         automatically matched to d1hyua3
         1. region b:1-102 [125844]
      5. 1zyp
         automatically matched to d1hyua4
         1. region b:103-196 [125845]
      6. 1zyn
         automatically matched to d1hyua3
         1. region a:1-102 [125838]
      7. 1zyn
         automatically matched to d1hyua4
         1. region a:103-196 [125839]
      8. 1zyn
         automatically matched to d1hyua3
         1. region b:1-102 [125840]
      9. 1zyn
         automatically matched to d1hyua4
         1. region b:103-196 [125841]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk