Structural Classification of Proteins
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Family: PFL-like

Pfam 02901; except the C-terminal ~100 residues covered by Pfam 01228

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PFL-like glycyl radical enzymes [51997]
    contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel
  4. Superfamily: PFL-like glycyl radical enzymes [51998]
    duplication: the N- and C-terminal halves have similar topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: PFL-like [51999]
    Pfam 02901; except the C-terminal ~100 residues covered by Pfam 01228

Protein Domains:

  1. Pyruvate formate-lyase, PFL [52000]
    1. Escherichia coli [TaxId: 562] [52001] (8)
      1. 1h16 picpic
        complexed with coa, dtl, mg, na, pg4, pyr
        1. chain a [76462] picpiclink
      2. 1h17 picpic
        complexed with coa, dtl, mg, na, oxm, pg4
        1. chain a [76463] picpiclink
      3. 1h18 picpic
        complexed with dtl, na, pg4, pyr
        1. chain a [76464] picpiclink
        2. chain b [76465] picpiclink
      4. 1cm5 picpic
        1. chain a [30671] picpiclink
        2. chain b [30672] picpiclink
      5. 1mzo picpic
        complexed with pge, pyr
        1. chain a [79708] picpiclink
        2. chain b [79709] picpiclink
      6. 3pfl picpic
        complexed with oxm
        1. chain a [30673] picpiclink
        2. chain b [30674] picpiclink
      7. 2pfl picpic
        1. chain a [30675] picpiclink
        2. chain b [30676] picpiclink
      8. 1qhm picpic
        1. chain a [30677] picpiclink
        2. chain b [30678] picpiclink
  2. Glycerol dehydratase DhaB1 [110445]
    1. Clostridium butyricum [TaxId: 1492] [110446] (3)
      SQ Q8GEZ8
      1. 1r9d picpic
        complexed with gol
        1. chain a [104865] picpiclink
        2. chain b [104866] picpiclink
      2. 1r9e picpic
        complexed with pgo
        1. chain a [104867] picpiclink
        2. chain b [104868] picpiclink
      3. 1r8w picpic
        1. chain a [104853] picpiclink
        2. chain b [104854] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk