Structural Classification of Proteins

Superfamily: TK C-terminal domain-like

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: TK C-terminal domain-like [52921]
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 13245, strand 1 is antiparallel to the rest
Superfamily: TK C-terminal domain-like [52922]
uperfamily

Families:

Transketolase C-terminal domain-like [52923] (5)
1. Transketolase (TK), C-domain [52924]
  two N-terminal domains are PP and Pyr modules of thiamin-binding fold
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52925] (7)
    1. 1gpu
      complexed with ca, thd
      1. region a:535-680 [65456]
      2. region b:535-680 [65459]
    2. 1trk
      complexed with ca, tpp
      1. region a:535-680 [33090]
      2. region b:535-680 [33091]
    3. 1tkb
      complexed with ca, n1t
      1. region a:535-680 [33092]
      2. region b:535-680 [33093]
    4. 1tkc
      complexed with ca, m6t
      1. region a:535-680 [33094]
      2. region b:535-680 [33095]
    5. 1ngs
      complexed with ca, e4p, tpp
      1. region a:535-680 [33098]
      2. region b:535-680 [33099]
    6. 1tka
      complexed with ca, n3t
      1. region a:535-680 [33096]
      2. region b:535-680 [33097]
    7. 1ay0
      complexed with ca, tpp; mutant
      1. region a:535-680 [33100]
      2. region b:535-680 [33101]
  2. Maize (Zea mays) [TaxId: 4577] [82430] (1)
    1. 1itz
      complexed with mg, tpp
      1. region a:540-675 [76799]
      2. region b:540-675 [76802]
      3. region c:540-675 [76805]
  3. Escherichia coli [TaxId: 562] [89712] (7)
    1. 2r8o
      automatically matched to d1qgda3
      complexed with ca, edo, t5x
      1. region a:528-663 [151733]
    2. 2r8o
      automatically matched to d1qgda3
      complexed with ca, edo, t5x
      1. region b:528-663 [151736]
    3. 2r5n
      automatically matched to d1qgda3
      complexed with ca, edo, r5p, rp5, tpp
      1. region a:528-663 [151593]
    4. 2r5n
      automatically matched to d1qgda3
      complexed with ca, edo, r5p, rp5, tpp
      1. region b:528-663 [151596]
    5. 2r8p
      automatically matched to d1qgda3
      complexed with ca, edo, t6f
      1. region a:528-663 [151739]
    6. 2r8p
      automatically matched to d1qgda3
      complexed with ca, edo, t6f
      1. region b:528-663 [151742]
    7. 1qgd
      complexed with ca, so4, tpp
      1. region a:528-663 [88369]
      2. region b:528-663 [88372]
  4. Leishmania mexicana mexicana [TaxId: 44270] [117610] (1)
    SQ Q8MPM3
    1. 1r9j
      complexed with ca, tpp
      1. region a:527-669 [111724]
      2. region b:527-669 [111727]
2. Pyruvate dehydrogenase E1 component, C-domain [75239]
  E1A and E1B fused together in a single-chain protein
  1. Escherichia coli [TaxId: 562] [75240] (14)
    1. 2iea
      automatically matched to d1l8aa3
      complexed with mg, tdp
      1. region a:701-886 [137296]
    2. 2iea
      automatically matched to d1l8aa3
      complexed with mg, tdp
      1. region b:701-886 [137299]
    3. 2qta
      automatically matched to d1l8aa3
      complexed with mg, tdp; mutant
      1. region a:701-886 [151335]
    4. 2qta
      automatically matched to d1l8aa3
      complexed with mg, tdp; mutant
      1. region b:701-886 [151338]
    5. 2qtc
      automatically matched to d1l8aa3
      complexed with mg, tdk; mutant
      1. region a:701-886 [151345]
    6. 2qtc
      automatically matched to d1l8aa3
      complexed with mg, tdk; mutant
      1. region b:701-886 [151348]
    7. 1l8a
      complexed with mg, tdp
      1. region a:701-886 [73679]
      2. region b:701-886 [73682]
    8. 2g28
      automatically matched to d1l8aa3
      complexed with mg, tdk
      1. region a:701-886 [134531]
    9. 2g28
      automatically matched to d1l8aa3
      complexed with mg, tdk
      1. region b:701-886 [134534]
    10. 2g25
      automatically matched to d1l8aa3
      complexed with mg, po4, tdk
      1. region a:701-886 [134525]
    11. 2g25
      automatically matched to d1l8aa3
      complexed with mg, po4, tdk
      1. region b:701-886 [134528]
    12. 1rp7
      complexed with mg, tzd
      1. region a:701-886 [97704]
      2. region b:701-886 [97707]
    13. 2g67
      automatically matched to d1l8aa3
      1. region a:701-886 [134697]
    14. 2g67
      automatically matched to d1l8aa3
      1. region b:701-886 [134700]
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain [52926] (6)
1. Branched-chain alpha-keto acid dehydrogenase [52927]
  1. Human (Homo sapiens) [TaxId: 9606] [52928] (21)
    SQ P21953 52-392
    1. 2bfd
      automatically matched to d1dtwb2
      complexed with cl, gol, k, mn, mpd, tdp; mutant
      1. region b:205-342 [128420]
    2. 2bff
      automatically matched to d1dtwb2
      complexed with gol, k, mn, tzd
      1. region b:205-342 [128422]
    3. 1x7y
      complexed with cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [114946]
    4. 2bfc
      automatically matched to d1dtwb2
      complexed with gol, k, mn, tzd; mutant
      1. region b:205-342 [128418]
    5. 1x7z
      complexed with cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [114949]
    6. 1x7w
      complexed with cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [114940]
    7. 2bev
      automatically matched to d1dtwb2
      complexed with cl, gol, k, mn, thy
      1. region b:205-342 [128394]
    8. 2bew
      automatically matched to d1dtwb2
      complexed with cl, gol, k, mn, thw
      1. region b:205-342 [128397]
    9. 1v16
      complexed with bdn, cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [108242]
    10. 1wci
      automatically matched to d1dtwb2
      complexed with cl, gol, k, mn, wwf
      1. region b:205-342 [120892]
    11. 1u5b
      complexed with gol, k, mn, tdp
      1. region b:205-342 [113036]
    12. 1v1r
      complexed with cl, gol, k, na, so4
      1. region b:205-342 [108274]
    13. 1olu
      complexed with gol, k, mg, tdp; mutant
      1. region b:205-342 [93337]
    14. 1v11
      complexed with bdn, cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [108229]
    15. 1ols
      complexed with gol, k, mn, tdp
      1. region b:205-342 [93333]
    16. 1v1m
      complexed with bdn, cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [108263]
    17. 2beu
      automatically matched to d1dtwb2
      complexed with cl, gol, k, mn, so4, thv
      1. region b:205-342 [128391]
    18. 1x80
      complexed with cl, gol, k, mn, tdp
      1. region b:205-342 [114952]
    19. 1x7x
      complexed with cl, gol, k, mn, tdp; mutant
      1. region b:205-342 [114943]
    20. 1olx
      complexed with gol, k, mn, tdp; mutant
      1. region b:205-342 [93340]
    21. 1dtw
      complexed with k, mg, tdp
      1. region b:205-342 [33102]
  2. Thermus thermophilus [TaxId: 274] [102468] (4)
    1. 1umd
      complexed with coi, mg, tdp
      1. region b:188-324 [99601]
      2. region d:188-324 [99604]
    2. 1umb
      complexed with mg, tdp
      1. region b:188-324 [99589]
      2. region d:188-324 [99592]
    3. 1um9
      complexed with so4
      1. region b:188-324 [99583]
      2. region d:188-324 [99586]
    4. 1umc
      complexed with 4mv, mg, tdp
      1. region b:188-324 [99595]
      2. region d:188-324 [99598]
2. 2-oxoisovalerate dehydrogenase E1b, C-domain [52929]
  1. Pseudomonas putida [TaxId: 303] [52930] (5)
    1. 1qs0
      complexed with hri, mg, tdp
      1. region b:206-339 [33103]
    2. 2bp7
      automatically matched to d1qs0b2
      1. region b:206-339 [128928]
    3. 2bp7
      automatically matched to d1qs0b2
      1. region d:206-339 [128931]
    4. 2bp7
      automatically matched to d1qs0b2
      1. region f:206-339 [128934]
    5. 2bp7
      automatically matched to d1qs0b2
      1. region h:206-339 [128937]
3. E1-beta subunit of pyruvate dehydrogenase, C-domain [69521]
  1. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [69522] (1)
    1. 1ik6
      1. region a:192-326 [66175]
  2. Human (Homo sapiens) [TaxId: 9606] [89713] (3)
    1. 2ozl
      automatically matched to d1ni4b2
      complexed with k, mg, tpp; mutant
      1. region b:192-329 [139448]
    2. 2ozl
      automatically matched to d1ni4b2
      complexed with k, mg, tpp; mutant
      1. region d:192-329 [139450]
    3. 1ni4
      complexed with k, mg, mse, tpp; mutant
      1. region b:192-329 [85730]
      2. region d:192-329 [85733]
4. Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain [117611]
  1. Bacillus stearothermophilus [TaxId: 1422] [117612] (2)
    SQ P21874
    1. 1w85
      complexed with k, mg, peg, tdp
      1. region b:193-324 [114337]
      2. region d:193-324 [114340]
      3. region f:193-324 [114343]
      4. region h:193-324 [114346]
    2. 1w88
      complexed with mg, tdp; mutant
      1. region b:193-324 [114351]
      2. region d:193-324 [114354]
      3. region f:193-324 [114357]
      4. region h:193-324 [114360]
Pyruvate-ferredoxin oxidoreductase, PFOR, domain II [52931] (1)
1. Pyruvate-ferredoxin oxidoreductase, PFOR, domain II [52932]
  1. Desulfovibrio africanus [TaxId: 873] [52933] (17)
    1. 2c42
      automatically matched to d1b0pa3
      complexed with ca, mg, pyr, sf4, tpp
      1. region a:259-415 [129792]
    2. 2c42
      automatically matched to d1b0pa3
      complexed with ca, mg, pyr, sf4, tpp
      1. region b:259-415 [129797]
    3. 2c3m
      automatically matched to d1b0pa3
      complexed with ca, cl, mg, sf4, tpp
      1. region a:259-415 [129742]
    4. 2c3m
      automatically matched to d1b0pa3
      complexed with ca, cl, mg, sf4, tpp
      1. region b:259-415 [129747]
    5. 2c3y
      automatically matched to d1b0pa3
      complexed with ca, co2, htl, mg, sf4
      1. region a:259-415 [129782]
    6. 2c3y
      automatically matched to d1b0pa3
      complexed with ca, co2, htl, mg, sf4
      1. region b:259-415 [129787]
    7. 1kek
      complexed with ca, co2, fs4, htl, mg
      1. region a:259-415 [68526]
      2. region b:259-415 [68531]
    8. 2c3p
      automatically matched to d1b0pa3
      complexed with 1tp, ca, mg, sf4
      1. region a:259-415 [129762]
    9. 2c3p
      automatically matched to d1b0pa3
      complexed with 1tp, ca, mg, sf4
      1. region b:259-415 [129767]
    10. 2uza
      automatically matched to d1b0pa3
      complexed with ca, co2, htl, mg, sf4
      1. region a:259-415 [152327]
    11. 2uza
      automatically matched to d1b0pa3
      complexed with ca, co2, htl, mg, sf4
      1. region b:259-415 [152332]
    12. 2c3u
      automatically matched to d1b0pa3
      complexed with 2tp, ca, mg, pyr, sf4
      1. region a:259-415 [129772]
    13. 2c3u
      automatically matched to d1b0pa3
      complexed with 2tp, ca, mg, pyr, sf4
      1. region b:259-415 [129777]
    14. 1b0p
      complexed with ca, fs4, mg, tpp
      1. region a:259-415 [33104]
      2. region b:259-415 [33105]
    15. 2c3o
      automatically matched to d1b0pa3
      complexed with ca, mg, pyr, sf4, tpp
      1. region a:259-415 [129752]
    16. 2c3o
      automatically matched to d1b0pa3
      complexed with ca, mg, pyr, sf4, tpp
      1. region b:259-415 [129757]
    17. 2pda
      complexed with ca, fs4, mg, pyr, tpp
      1. region a:259-415 [33106]
      2. region b:259-415 [33107]