Structural Classification of Proteins
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Superfamily: PK C-terminal domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Pyruvate kinase C-terminal domain-like [52934]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145, strand 5 is antiparallel to the rest
  4. Superfamily: PK C-terminal domain-like [52935]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Pyruvate kinase, C-terminal domain [52936] (6)
    1. Pyruvate kinase, C-terminal domain [52937]
      1. Cat (Felis catus) [TaxId: 9685] [52938] (1)
        1. 1pkm picpicxrefxref
          1. region a:396-530 [33108] picpiclink
      2. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [52939] (14)
        1. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region a:396-530 [134620] picpiclink
        2. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region b:396-530 [134623] picpiclink
        3. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region c:396-530 [134626] picpiclink
        4. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region d:396-530 [134629] picpiclink
        5. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region e:396-530 [134632] picpiclink
        6. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region f:396-530 [134635] picpiclink
        7. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region g:396-530 [134638] picpiclink
        8. 2g50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1a49a3
          complexed with ala, edo, ete, gol, k, mn, na, pyr
          1. region h:396-530 [134641] picpiclink
        9. 1a49 picpicxrefxref
          complexed with atp, k, mg, oxl
          1. region a:396-530 [33109] picpiclink
          2. region b:996-1130 [33110] picpiclink
          3. region c:1596-1730 [33111] picpiclink
          4. region d:2196-2330 [33112] picpiclink
          5. region e:3396-3530 [33113] picpiclink
          6. region f:3996-4130 [33114] picpiclink
          7. region g:4596-4730 [33115] picpiclink
          8. region h:5196-5330 [33116] picpiclink
        10. 1a5u picpicxrefxref
          complexed with atp, mg, na, oxl
          1. region a:396-530 [33117] picpiclink
          2. region b:996-1130 [33118] picpiclink
          3. region c:1596-1730 [33119] picpiclink
          4. region d:2196-2330 [33120] picpiclink
          5. region e:3396-3530 [33121] picpiclink
          6. region f:3996-4130 [33122] picpiclink
          7. region g:4596-4730 [33123] picpiclink
          8. region h:5196-5330 [33124] picpiclink
        11. 1f3x picpicxrefxref
          complexed with k, mn, pyr; mutant
          1. region a:396-530 [64960] picpiclink
          2. region b:396-530 [64963] picpiclink
          3. region c:396-530 [64966] picpiclink
          4. region d:396-530 [64969] picpiclink
          5. region e:396-530 [64972] picpiclink
          6. region f:396-530 [64975] picpiclink
          7. region g:396-530 [64978] picpiclink
          8. region h:396-530 [64981] picpiclink
        12. 1f3w picpicxrefxref
          complexed with k, mn, pyr
          1. region a:396-530 [64936] picpiclink
          2. region b:396-530 [64939] picpiclink
          3. region c:396-530 [64942] picpiclink
          4. region d:396-530 [64945] picpiclink
          5. region e:396-530 [64948] picpiclink
          6. region f:396-530 [64951] picpiclink
          7. region g:396-530 [64954] picpiclink
          8. region h:396-530 [64957] picpiclink
        13. 1aqf picpicxrefxref
          complexed with k, mg, pep
          1. region a:396-530 [33126] picpiclink
          2. region b:396-530 [33127] picpiclink
          3. region c:396-530 [33128] picpiclink
          4. region d:396-530 [33129] picpiclink
          5. region e:396-530 [33130] picpiclink
          6. region f:396-530 [33131] picpiclink
          7. region g:396-530 [33132] picpiclink
          8. region h:396-530 [33133] picpiclink
        14. 1pkn picpicxrefxref
          complexed with k p, mn, pyr
          1. region a:396-530 [33125] picpiclink
      3. Human (Homo sapiens) [TaxId: 9606] [82431] (4)
        1. 1liu picpicxrefxref
          complexed with fbp, k, mn, pga
          1. region a:440-573 [77972] picpiclink
          2. region b:440-573 [77975] picpiclink
          3. region c:440-573 [77978] picpiclink
          4. region d:440-573 [77981] picpiclink
        2. 1liw picpicxrefxref
          complexed with fbp, k, mn, pga; mutant
          1. region a:440-573 [77984] picpiclink
          2. region b:440-573 [77987] picpiclink
          3. region c:440-573 [77990] picpiclink
          4. region d:440-573 [77993] picpiclink
        3. 1liy picpicxrefxref
          complexed with fbp, k, mn, pga; mutant
          1. region a:440-573 [78008] picpiclink
          2. region b:440-573 [78011] picpiclink
          3. region c:440-573 [78014] picpiclink
          4. region d:440-573 [78017] picpiclink
        4. 1lix picpicxrefxref
          complexed with fbp, k, mn, pga; mutant
          1. region a:440-573 [77996] picpiclink
          2. region b:440-573 [77999] picpiclink
          3. region c:440-573 [78002] picpiclink
          4. region d:440-573 [78005] picpiclink
      4. Leishmania mexicana [TaxId: 5665] [52940] (8)
        1. 1pkl picpicxrefxref
          complexed with so4
          1. region a:358-498 [33134] picpiclink
          2. region b:358-498 [33135] picpiclink
          3. region c:358-498 [33136] picpiclink
          4. region d:358-498 [33137] picpiclink
          5. region e:358-498 [33138] picpiclink
          6. region f:358-498 [33139] picpiclink
          7. region g:358-498 [33140] picpiclink
          8. region h:358-498 [33141] picpiclink
        2. 3e0w picpicxrefxref
          automatically matched to d1pkla3
          mutant
          1. region a:358-498 [157968] picpiclink
        3. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region a:358-498 [157950] picpiclink
        4. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region b:358-498 [157953] picpiclink
        5. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region c:358-498 [157956] picpiclink
        6. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region d:358-498 [157959] picpiclink
        7. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region e:358-498 [157962] picpiclink
        8. 3e0v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1pkla3
          complexed with gol, so4; mutant
          1. region f:358-498 [157965] picpiclink
      5. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52941] (2)
        1. 1a3x picpicxrefxref
          complexed with k, mn, pga
          1. region a:367-500 [33144] picpiclink
          2. region b:367-500 [33145] picpiclink
        2. 1a3w picpicxrefxref
          complexed with fbp, k, mn, pga
          1. region a:367-500 [33142] picpiclink
          2. region b:367-500 [33143] picpiclink
      6. Escherichia coli [TaxId: 562] [52942] (3)
        1. 1e0t picpicxrefxref
          complexed with so4; mutant
          1. region a:354-470 [33146] picpiclink
          2. region b:354-470 [33147] picpiclink
          3. region c:354-470 [33148] picpiclink
          4. region d:354-470 [33149] picpiclink
        2. 1pky picpicxrefxref
          1. region a:351-470 [33150] picpiclink
          2. region b:351-470 [33151] picpiclink
          3. region c:351-470 [33152] picpiclink
          4. region d:351-470 [33153] picpiclink
        3. 1e0u picpicxrefxref
          complexed with so4; mutant
          1. region a:354-470 [33154] picpiclink
          2. region b:354-470 [33155] picpiclink
          3. region c:354-470 [33156] picpiclink
          4. region d:354-470 [33157] picpiclink
  2. MTH1675-like [110616] (2)
    PfamB 019040; probable flavoenzyme, binds FMN; the phosphoribityl group binds in the equivalent site to the binding site of the PK allosteric regulator FBP
    1. Hypothetical protein MTH1675 [110617]
      1. Methanobacterium thermoautotrophicum [TaxId: 145262] [110618] (1)
        SQ O27711
        1. 1t57 picpic
          Structural genomics target
          complexed with fmn, mg
          1. chain a [106430] picpiclink
          2. chain b [106431] picpiclink
          3. chain c [106432] picpiclink
    2. Hypothetical protein AF0103 [117613]
      1. Archaeoglobus fulgidus [TaxId: 2234] [117614] (1)
        SQ O30133
        1. 1vp8 picpic
          Structural genomics target
          complexed with fmn, unl
          1. chain a [113947] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk