Structural Classification of Proteins
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Family: XPF/Rad1/Mus81 nuclease

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Restriction endonuclease-like [52979]
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. Superfamily: Restriction endonuclease-like [52980]
    link to SUPERFAMILY database - Superfamily
  5. Family: XPF/Rad1/Mus81 nuclease [89716]

Protein Domains:

  1. Putative ATP-dependent RNA helicase Hef, nuclease domain [89717]
    1. Archaeon Pyrococcus furiosus [TaxId: 2261] [89718] (4)
      1. 1j23 picpic
        mutant
        1. chain a [84007] picpiclink
      2. 1j24 picpic
        complexed with ca; mutant
        1. chain a [84008] picpiclink
      3. 1j22 picpic
        mutant
        1. chain a [84006] picpiclink
      4. 1j25 picpic
        complexed with mn; mutant
        1. chain a [84009] picpiclink
  2. DNA excision repair protein ERCC-1 [142445]
    1. Human (Homo sapiens) [TaxId: 9606] [142446] (3)
      SQ P07992 99-227
      1. 2a1i picpic
        complexed with hg
        1. region a:99-227 [125999] picpiclink
      2. 2jpd picpic
        automatically matched to d2a1ia1
        1. region a:99-219 [148165] picpiclink
      3. 2jnw picpic
        automatically matched to d2a1ia1
        1. region a:99-214 [148152] picpiclink
  3. XPF endonuclease [142447]
    1. Aeropyrum pernix [TaxId: 56636] [142448] (6)
      SQ Q9YC15 16-148
      1. 2bgw picpicxrefxref
        complexed with mg, so4
        1. region a:16-148 [128501] picpiclink
      2. 2bgw picpicxrefxref
        automatically matched to 2BGW A:16-148
        complexed with mg, so4
        1. region b:18-148 [128503] picpiclink
      3. 2bhn picpicxrefxrefxrefxref
        automatically matched to 2BGW A:16-148
        1. region a:19-148 [128535] picpiclink
      4. 2bhn picpicxrefxrefxrefxref
        automatically matched to 2BGW A:16-148
        1. region b:19-148 [128537] picpiclink
      5. 2bhn picpicxrefxrefxrefxref
        automatically matched to 2BGW A:16-148
        1. region c:20-147 [128539] picpiclink
      6. 2bhn picpicxrefxrefxrefxref
        automatically matched to 2BGW A:16-148
        1. region d:19-148 [128541] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk