Structural Classification of Proteins
home mail help root up expand collapse

Family: BadF/BadG/BcrA/BcrD-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribonuclease H-like motif [53066]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. Superfamily: Actin-like ATPase domain [53067]
    duplication contains two domains of this fold
    link to SUPERFAMILY database - Superfamily
  5. Family: BadF/BadG/BcrA/BcrD-like [64089]

Protein Domains:

  1. Hydroxyglutaryl-CoA dehydratase component A [64090]
    1. Acidaminococcus fermentans [TaxId: 905] [64091] (1)
      1. 1hux picpic
        complexed with adp, fs4
        1. chain a [61278] picpiclink
        2. chain b [61279] picpiclink
  2. Hypothetical protein PG1100 [142452]
    1. Porphyromonas gingivalis [TaxId: 837] [142453] (2)
      SQ Q7MVG4 1-107! SQ Q7MVG4 108-283
      1. 1zbs picpic
        1. region a:108-283 [124870] picpiclink
      2. 1zbs picpic
        1. region a:1-107 [124871] picpiclink
  3. Probable N-acetylglucosamine kinase CV2896 [142454]
    1. Chromobacterium violaceum [TaxId: 536] [142455] (4)
      SQ Q7NU07 122-292! SQ Q7NU07 8-121
      1. 1zc6 picpic
        1. region a:8-121 [124888] picpiclink
      2. 1zc6 picpic
        1. region a:122-292 [124889] picpiclink
      3. 1zc6 picpic
        automatically matched to 1ZC6 A:8-121
        1. region b:8-121 [124890] picpiclink
      4. 1zc6 picpic
        automatically matched to 1ZC6 A:122-292
        1. region b:122-292 [124891] picpiclink
  4. Hypothetical protein BT3618 [142456]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [142457] (12)
      SQ Q8A1P1 107-280! SQ Q8A1P1 3-106
      1. 1zxo picpic
        1. region a:3-106 [125784] picpiclink
      2. 1zxo picpic
        1. region a:107-280 [125785] picpiclink
      3. 1zxo picpic
        automatically matched to 1ZXO A:3-106
        1. region b:3-106 [125786] picpiclink
      4. 1zxo picpic
        automatically matched to 1ZXO A:107-280
        1. region b:107-280 [125787] picpiclink
      5. 1zxo picpic
        automatically matched to 1ZXO A:3-106
        1. region c:3-106 [125788] picpiclink
      6. 1zxo picpic
        automatically matched to 1ZXO A:107-280
        1. region c:107-280 [125789] picpiclink
      7. 1zxo picpic
        automatically matched to 1ZXO A:3-106
        1. region d:3-106 [125790] picpiclink
      8. 1zxo picpic
        automatically matched to 1ZXO A:107-280
        1. region d:107-280 [125791] picpiclink
      9. 1zxo picpic
        automatically matched to 1ZXO A:3-106
        1. region e:3-106 [125792] picpiclink
      10. 1zxo picpic
        automatically matched to 1ZXO A:107-280
        1. region e:107-280 [125793] picpiclink
      11. 1zxo picpic
        automatically matched to 1ZXO A:3-106
        1. region f:3-106 [125794] picpiclink
      12. 1zxo picpic
        automatically matched to 1ZXO A:107-280
        1. region f:107-277 [125795] picpiclink
  5. N-acetylglucosamine kinase, NAGK [142458]
    1. Human (Homo sapiens) [TaxId: 9606] [142459] (16)
      SQ Q9UJ70 1-117! SQ Q9UJ70 118-344
      1. 2ch5 picpic
        complexed with gol, nag, ndg
        1. region a:118-344 [130453] picpiclink
      2. 2ch5 picpic
        complexed with gol, nag, ndg
        1. region a:1-117 [130454] picpiclink
      3. 2ch5 picpic
        automatically matched to 2CH5 A:118-344
        complexed with gol, nag, ndg
        1. region b:118-344 [130455] picpiclink
      4. 2ch5 picpic
        automatically matched to 2CH5 A:1-117
        complexed with gol, nag, ndg
        1. region b:1-117 [130456] picpiclink
      5. 2ch5 picpic
        automatically matched to 2CH5 A:118-344
        complexed with gol, nag, ndg
        1. region c:118-344 [130457] picpiclink
      6. 2ch5 picpic
        automatically matched to 2CH5 A:1-117
        complexed with gol, nag, ndg
        1. region c:1-117 [130458] picpiclink
      7. 2ch5 picpic
        automatically matched to 2CH5 A:118-344
        complexed with gol, nag, ndg
        1. region d:118-344 [130459] picpiclink
      8. 2ch5 picpic
        automatically matched to 2CH5 A:1-117
        complexed with gol, nag, ndg
        1. region d:1-117 [130460] picpiclink
      9. 2ch6 picpic
        automatically matched to 2CH5 A:118-344
        complexed with adp, glc
        1. region a:118-344 [130461] picpiclink
      10. 2ch6 picpic
        automatically matched to 2CH5 A:1-117
        complexed with adp, glc
        1. region a:2-117 [130462] picpiclink
      11. 2ch6 picpic
        automatically matched to 2CH5 A:118-344
        complexed with adp, glc
        1. region b:118-344 [130463] picpiclink
      12. 2ch6 picpic
        automatically matched to 2CH5 A:1-117
        complexed with adp, glc
        1. region b:6-117 [130464] picpiclink
      13. 2ch6 picpic
        automatically matched to 2CH5 A:118-344
        complexed with adp, glc
        1. region c:118-344 [130465] picpiclink
      14. 2ch6 picpic
        automatically matched to 2CH5 A:1-117
        complexed with adp, glc
        1. region c:2-117 [130466] picpiclink
      15. 2ch6 picpic
        automatically matched to 2CH5 A:118-344
        complexed with adp, glc
        1. region d:118-344 [130467] picpiclink
      16. 2ch6 picpic
        automatically matched to 2CH5 A:1-117
        complexed with adp, glc
        1. region d:2-117 [130468] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk