Structural Classification of Proteins
Superfamily: Translational machinery components
uperfamily
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a/b)
[51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold:
Ribonuclease H-like motif
[53066]
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily:
Translational machinery components
[53137]
uperfamily
Families:
Ribosomal protein L18 and S11
[53138] (7)
Ribosomal protein L18 (L18p) [53139]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[53140] (40)
SQ
P14123
1vqo
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region n:1-186
[120375]
1vq8
automatically matched to d1ffkk_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region n:1-186
[120201]
1vqp
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region n:1-186
[120404]
1jj2
complexed with cd, cl, k, mg, na
chain m
[63098]
1yhq
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region n:1-186
[123196]
1vql
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region n:1-186
[120288]
1vqk
automatically matched to d1ffkk_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region n:1-186
[120259]
1s72
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
chain n
[105333]
1vqm
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region n:1-186
[120317]
1vqn
automatically matched to d1ffkk_
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region n:1-186
[120346]
1yi2
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region n:1-186
[123243]
1yij
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region n:1-186
[123311]
1vq7
automatically matched to d1ffkk_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region n:1-186
[120172]
1vq4
automatically matched to d1ffkk_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region n:1-186
[120085]
2otl
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region n:1-186
[139359]
1vq5
automatically matched to d1ffkk_
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region n:1-186
[120114]
1vq9
automatically matched to d1ffkk_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region n:1-186
[120230]
1m90
complexed with aca, cd, cl, k, mg, na, pha, sps
chain o
[78853]
1yit
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region n:1-186
[123354]
1vq6
automatically matched to d1ffkk_
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region n:1-186
[120143]
2otj
automatically matched to d1ffkk_
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region n:1-186
[139330]
1yjw
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region n:1-186
[123478]
1nji
complexed with cd, cl, clm, k, mg, na; mutant
chain o
[85806]
1kqs
complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
chain m
[68828]
1kc8
complexed with bls, cd, cl, k, mg, na
chain o
[84370]
1yjn
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region n:1-186
[123446]
1n8r
complexed with cd, cl, k, mg, na, vir; mutant
chain o
[85442]
1k73
complexed with anm, cd, cl, k, mg, na
chain o
[84331]
1yj9
automatically matched to d1ffkk_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region n:1-186
[123407]
1qvg
complexed with cd, cl, k, mg, na
chain m
[96405]
1q82
complexed with cd, cl, k, mg, na, ppu
chain o
[96142]
1qvf
complexed with cd, cl, k, mg, na
chain m
[96375]
1q81
complexed with cd, cl, k, mg, na, ppu
chain o
[96112]
1k9m
complexed with cd, cl, k, mg, na, tyk
chain o
[72226]
1kd1
complexed with cd, cl, k, mg, na, spr
chain o
[72337]
1k8a
complexed with cai, cd, cl, k, mg, na
chain o
[72159]
1m1k
complexed with cd, cl, k, mg, na, zit
chain o
[74397]
1q86
complexed with cd, cl, k, mg, na, pha
chain o
[96180]
1q7y
complexed with cd, cl, k, mg, na, po4, puy
chain o
[96078]
1ffk
complexed with cd, k, mo3; mutant
chain k
[33731]
Thermus thermophilus
[TaxId: 274]
[75245] (7)
2j01
automatically matched to d1ilya_
region s:23-108
[145575]
2j03
automatically matched to d1ilya_
complexed with lys
region s:23-108
[145602]
1ily
chain a
[71245]
2hgq
automatically matched to d1ilya_
region r:23-108
[145353]
1vsa
automatically matched to d1ilya_
region m:23-108
[144525]
2hgj
automatically matched to d1ilya_
region r:23-108
[145321]
2hgu
automatically matched to d1ilya_
region r:23-108
[145385]
Bacillus stearothermophilus
[TaxId: 1422]
[102495] (1)
1ovy
chain a
[93624]
Escherichia coli
[TaxId: 562]
[159642] (29)
SQ
P0C018
1-117
2gyc
automatically matched to 2AW4 O:1-117
region m:3-115
[145271]
2gya
automatically matched to 2AW4 O:1-117
region m:3-115
[145249]
2qam
automatically matched to 2AW4 O:1-117
complexed with mg, nmy, zn
region o:2-117
[150255]
2qao
automatically matched to 2AW4 O:1-117
complexed with mg, nmy, zn
region o:2-117
[150308]
2i2t
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[145455]
2i2v
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[145497]
2qbe
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[150475]
2qbg
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[150529]
2qoz
automatically matched to 2AW4 O:1-117
complexed with mg, nmy, zn
region o:2-117
[151131]
2qp1
automatically matched to 2AW4 O:1-117
complexed with mg, nmy, zn
region o:2-117
[151184]
3df2
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[157644]
3df4
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[157698]
2qba
automatically matched to 2AW4 O:1-117
complexed with lll, mg, zn
region o:2-117
[150368]
2qbc
automatically matched to 2AW4 O:1-117
complexed with lll, mg, zn
region o:2-117
[150421]
2qbi
automatically matched to 2AW4 O:1-117
complexed with lll, mg, zn
region o:2-117
[150583]
2qbk
automatically matched to 2AW4 O:1-117
complexed with lll, mg, zn
region o:2-117
[150637]
2qov
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[151025]
2qox
automatically matched to 2AW4 O:1-117
complexed with mg, zn
region o:2-117
[151078]
1vs6
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[144470]
1vs8
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[144511]
2aw4
Representative structure
complexed with mg
region o:1-117
[144879]
2awb
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[144920]
2z4l
automatically matched to 2AW4 O:1-117
complexed with mg, par, zn
region o:2-117
[154093]
2z4n
automatically matched to 2AW4 O:1-117
complexed with mg, par, zn
region o:2-117
[154147]
2vhm
automatically matched to 2AW4 O:1-117
complexed with mg; mutant
region o:1-117
[153078]
2vhn
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[153110]
2rdo
automatically matched to 2AW4 O:1-117
region o:1-117
[151955]
2j28
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[145636]
3bbx
automatically matched to 2AW4 O:1-117
complexed with mg
region o:1-117
[155112]
Deinococcus radiodurans
[TaxId: 1299]
[159643] (6)
SQ
Q9RSL2
8-111
2zjr
Representative structure
complexed with mg
region l:8-111
[154565]
1xbp
automatically matched to 2ZJR L:8-111
complexed with mul
region m:8-111
[145878]
2zjq
automatically matched to 2ZJR L:8-111
region l:8-111
[154536]
3cf5
automatically matched to 2ZJR L:8-111
complexed with mg, txx
region l:8-111
[156552]
2zjp
automatically matched to 2ZJR L:8-111
complexed with mg, nsh, zn
region l:8-111
[154504]
3dll
automatically matched to 2ZJR L:8-111
complexed with mg, zld, zn
region l:8-111
[157789]
Ribosomal protein S11 [53141]
Thermus thermophilus
[TaxId: 274]
[53142] (46)
SQ
P80376
2uub
automatically matched to d1i94k_
complexed with 6mz, cm0, k, mg, par, zn
region k:11-129
[139942]
2vqe
automatically matched to d1i94k_
complexed with k, mg, par, tm2, zn
region k:11-126
[153435]
1fjg
complexed with mg, par, scm, sry, zn
chain k
[33733]
2vqf
automatically matched to d1i94k_
complexed with k, mg, par, tm2, zn
region k:11-126
[153454]
1j5e
complexed with unx, zn
chain k
[71554]
2uxc
automatically matched to d1i94k_
complexed with k, mg, par, zn
region k:11-129
[140014]
2uuc
automatically matched to d1i94k_
complexed with 6mz, cm0, k, mg, par, zn
region k:11-129
[139962]
2uua
automatically matched to d1i94k_
complexed with 6mz, cm0, k, mg, par, zn
region k:11-129
[139922]
1xmq
complexed with mg, par, t6a, zn
chain k
[115540]
1n32
complexed with mg, par, psu, zn
chain k
[79880]
2uu9
automatically matched to d1i94k_
complexed with 6mz, cm0, k, mg, par, zn
region k:11-129
[139902]
1xnq
complexed with mg, par, zn
chain k
[115614]
1xnr
complexed with mg, par, zn
chain k
[115636]
1hr0
complexed with mg, zn
chain k
[33734]
1hnz
complexed with hyg, mg, zn
chain k
[33735]
2j02
automatically matched to d1i94k_
complexed with 5mu, mg, par, zn
region k:11-129
[137876]
2j00
automatically matched to d1i94k_
complexed with 5mu, mg, par, zn
region k:11-129
[137849]
2uxd
automatically matched to d1i94k_
complexed with k, mg, par, zn
region k:11-126
[152291]
1xmo
complexed with mg, mnu, par, t6a, zn
chain k
[115510]
1hnw
complexed with mg, tac, zn
chain k
[33736]
2e5l
automatically matched to d1i94k_
complexed with zn
region k:11-125
[132035]
3d5a
automatically matched to d1i94k_
complexed with mg, zn
region k:11-126
[157345]
3d5c
automatically matched to d1i94k_
complexed with mg, zn
region k:11-126
[157375]
1i94
complexed with mg, wo2, zn
chain k
[62002]
1hnx
complexed with mg, pcy, zn
chain k
[33737]
1n33
complexed with mg, par, psu, zn
chain k
[79902]
2hhh
automatically matched to d1i94k_
complexed with ksg
region k:11-129
[136487]
1i96
complexed with mg, wo2, zn
chain k
[62046]
2uxb
automatically matched to d1i94k_
complexed with k, mg, par, zn
region k:11-126
[152272]
1n34
complexed with zn
chain k
[79924]
2v46
automatically matched to d1i94k_
complexed with 5mu, mg, zn
region k:11-126
[152493]
2v48
automatically matched to d1i94k_
complexed with 5mu, mg, zn
region k:11-126
[152529]
1i97
complexed with mg, tac, wo2, zn
chain k
[62069]
1n36
complexed with zn
chain k
[79947]
1i95
complexed with ede, mg, wo2, zn
chain k
[62024]
2f4v
automatically matched to d1i94k_
complexed with ab9, d2c, k, mg, zn
region k:11-129
[132948]
2qnh
automatically matched to d1i94k_
complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
region l:11-126
[150935]
2hgp
automatically matched to d1i94k_
region n:11-129
[136430]
2hgi
automatically matched to d1i94k_
region n:11-129
[136409]
2hgr
automatically matched to d1i94k_
region n:11-129
[136451]
2ow8
automatically matched to d1i94k_
complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
region l:11-126
[139409]
1x18
automatically matched to d1i94k_
complexed with du
region g:11-129
[121575]
1yl4
automatically matched to d1i94k_
region n:11-129
[123607]
2b64
automatically matched to d1i94k_
complexed with psu, yyg
region k:11-129
[127943]
2b9o
automatically matched to d1i94k_
complexed with psu, yyg
region k:11-129
[128173]
2b9m
automatically matched to d1i94k_
complexed with psu, yyg
region k:11-129
[128136]
Escherichia coli
[TaxId: 562]
[159644] (24)
SQ
P0A7R9
12-128
2qal
automatically matched to 2AVY K:12-128
complexed with mg, nmy
region k:12-128
[150224]
2qan
automatically matched to 2AVY K:12-128
complexed with mg, nmy
region k:12-128
[150278]
2qbf
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[150498]
2qbd
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[150444]
1vs5
automatically matched to 2AVY K:12-128
complexed with ksg, mg
region k:12-128
[144445]
3df1
automatically matched to 2AVY K:12-128
complexed with hyg, mg
region k:12-128
[157613]
3df3
automatically matched to 2AVY K:12-128
complexed with hyg, mg
region k:12-128
[157667]
1vs7
automatically matched to 2AVY K:12-128
complexed with ksg, mg
region k:12-128
[144486]
2qoy
automatically matched to 2AVY K:12-128
complexed with mg, nmy, scm
region k:12-128
[151101]
2qp0
automatically matched to 2AVY K:12-128
complexed with mg, nmy, scm
region k:12-128
[151154]
2avy
Representative structure
complexed with mg
region k:12-128
[144852]
2aw7
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[144895]
2qb9
automatically matched to 2AVY K:12-128
complexed with lll, mg
region k:12-128
[150338]
2qbb
automatically matched to 2AVY K:12-128
complexed with lll, mg
region k:12-128
[150391]
2i2p
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[145430]
2i2u
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[145472]
2qbh
automatically matched to 2AVY K:12-128
complexed with lll, mg
region k:12-128
[150552]
2qbj
automatically matched to 2AVY K:12-128
complexed with lll, mg
region k:12-128
[150606]
2qou
automatically matched to 2AVY K:12-128
complexed with mg, scm
region k:12-128
[150995]
2qow
automatically matched to 2AVY K:12-128
complexed with mg, scm
region k:12-128
[151048]
2z4m
automatically matched to 2AVY K:12-128
complexed with mg, par
region k:12-128
[154116]
2vho
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[153133]
2z4k
automatically matched to 2AVY K:12-128
complexed with mg, par
region k:12-128
[154062]
2vhp
automatically matched to 2AVY K:12-128
complexed with mg
region k:12-128
[153155]
ERF1/Dom34 middle domain-like
[53143] (3)
Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1 [53144]
Human (Homo sapiens)
[TaxId: 9606]
[53145] (2)
1dt9
region a:143-276
[33738]
2hst
automatically matched to d1dt9a1
region a:143-275
[147395]
Dom34 [159645]
Saccharomyces cerevisiae
[TaxId: 4932]
[159646] (3)
SQ
P33309
136-277
2vgn
automatically matched to 2VGM A:136-277
complexed with gol, po4
region a:136-277
[153041]
2vgn
automatically matched to 2VGM A:136-277
complexed with gol, po4
region b:136-277
[153044]
2vgm
region a:136-277
[153038]
Cell division protein pelota [159647]
Thermoplasma acidophilum
[TaxId: 2303]
[159648] (1)
SQ
Q9HJ74
127-243
2qi2
region a:127-243
[150801]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk