Fold: Phosphorylase/hydrolase-like

core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Phosphorylase/hydrolase-like [53162]
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Superfamilies:

1. HybD-like [53163] (2)
   the HybD fold coincides with the consensus core structure
   uperfamily
   1. Hydrogenase maturating endopeptidase HybD [53164] (1)
      1. Hydrogenase maturating endopeptidase HybD [53165]
         1. Escherichia coli [TaxId: 562] [53166] (1)
            1. 1cfz
               complexed with cd
               1. chain a [33754]
               2. chain b [33755]
               3. chain c [33756]
               4. chain d [33757]
               5. chain e [33758]
               6. chain f [33759]
   2. Germination protease [64095] (1)
      elaborated with the N-terminal alpha+beta subdomain and the insertion all-alpha dimerisation subdomain
      1. Germination protease [64096]
         1. Bacillus megaterium [TaxId: 1404] [64097] (1)
            1. 1c8b
               1. chain a [59082]
               2. chain b [59083]
2. Purine and uridine phosphorylases [53167] (1)
   complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
   uperfamily
   1. Purine and uridine phosphorylases [53168] (18)
      1. Purine nucleoside phosphorylase, PNP [53169]
         1. Human (Homo sapiens) [TaxId: 9606] [53170] (17)
            SQ P00491
            1. 3bgs
               automatically matched to d1ulaa_
               complexed with dih, po4
               1. region a:1-284 [155253]
            2. 1rsz
               automatically matched to d1ula__
               complexed with dih, so4
               1. region a:3-284 [118790]
            3. 1m73
               complexed with so4
               1. chain e [91211]
            4. 1rt9
               automatically matched to d1ula__
               complexed with imh, so4
               1. region a:3-284 [118791]
            5. 1rr6
               automatically matched to d1ula__
               complexed with imh, po4
               1. region a:3-284 [118789]
            6. 1pf7
               complexed with imh, so4
               1. chain e [104142]
            7. 1v2h
               complexed with gun, so4
               1. chain e [100271]
            8. 1v41
               complexed with azg, so4
               1. chain e [113520]
            9. 1yry
               automatically matched to d1ula__
               complexed with msg, so4
               1. region e:3-284 [123947]
            10. 1v45
                complexed with 3dg, so4
                1. chain e [113524]
            11. 1rct
                complexed with nos, so4
                1. chain e [97294]
            12. 1v3q
                complexed with 2di, so4
                1. chain e [100290]
            13. 1pwy
                complexed with ac2, so4
                1. chain e [95266]
            14. 1rfg
                complexed with gmp, so4
                1. chain e [111797]
            15. 2q7o
                automatically matched to d1ulaa_
                complexed with imh, po4
                1. region e:1-284 [150096]
            16. 1ulb
                complexed with gun, so4
                1. chain a [33760]
            17. 1ula
                1. chain a [33761]
         2. Cow (Bos taurus) [TaxId: 9913] [53171] (20)
            SQ P55859
            1. 3pnp
               complexed with mg, po4
               1. chain a [33763]
            2. 1b8o
               complexed with imh, mg, po4
               1. chain a [33762]
            3. 2ai2
               automatically matched to d1v48a_
               complexed with 144, mg, p1d, zn
               1. region a:3-282 [126814]
            4. 2ai3
               automatically matched to d1v48a_
               complexed with 144, mg, p2g, zn
               1. region a:3-282 [126815]
            5. 4pnp
               complexed with po4
               1. chain a [33764]
            6. 1lvu
               complexed with 9pp, ca
               1. chain a [91146]
               2. chain b [91147]
               3. chain c [91148]
               4. chain d [91149]
               5. chain e [91150]
               6. chain f [91151]
            7. 1a9r
               complexed with hpa, so4
               1. chain a [33767]
            8. 1a9s
               complexed with nos, so4
               1. chain a [33768]
            9. 2ai1
               automatically matched to d1v48a_
               complexed with 144, mg, p1g, zn
               1. region a:3-282 [126813]
            10. 2qpl
                automatically matched to d1v48a_
                complexed with bty, mg, so4
                1. region a:3-284 [151206]
            11. 1a9t
                complexed with hpa, r1p
                1. chain a [33765]
            12. 1a9q
                complexed with hpa, so4
                1. chain a [33769]
            13. 1b8n
                complexed with img, mg, po4
                1. chain a [33766]
            14. 1a9o
                complexed with po4
                1. chain a [33770]
            15. 1v48
                complexed with ha1, mg, zn
                1. chain a [108349]
            16. 1pbn
                1. chain a [33771]
            17. 1fxu
                complexed with gu7, mg, po4, zn
                1. chain a [33772]
            18. 1lv8
                complexed with 9pp, ca
                1. chain a [91132]
                2. chain b [91133]
                3. chain c [91134]
                4. chain d [91135]
                5. chain e [91136]
                6. chain f [91137]
            19. 1vfn
                complexed with hpa, mg, zn
                1. chain a [33773]
            20. 1a9p
                complexed with 9di, po4
                1. chain a [33774]
         3. Escherichia coli [TaxId: 562] [53172] (19)
            1. 1k9s
               complexed with fm1, fm2, po4
               1. chain a [68359]
               2. chain b [68360]
               3. chain c [68361]
               4. chain d [68362]
               5. chain e [68363]
               6. chain f [68364]
            2. 1pk9
               complexed with 2fa, po4
               1. chain a [94823]
               2. chain b [94824]
               3. chain c [94825]
            3. 1pr6
               complexed with po4, xya
               1. chain a [95057]
               2. chain b [95058]
               3. chain c [95059]
            4. 1pw7
               complexed with po4, rab
               1. chain a [95202]
               2. chain b [95203]
               3. chain c [95204]
            5. 1pr2
               complexed with mdr, po4
               1. chain a [95048]
               2. chain b [95049]
               3. chain c [95050]
            6. 1ecp
               1. chain a [33775]
               2. chain b [33776]
               3. chain c [33777]
               4. chain d [33778]
               5. chain e [33779]
               6. chain f [33780]
            7. 1pke
               complexed with 2fd, po4
               1. chain a [94826]
               2. chain b [94827]
               3. chain c [94828]
            8. 1ovg
               complexed with mdr, po4; mutant
               1. chain a [93596]
               2. chain b [93597]
               3. chain c [93598]
            9. 1a69
               complexed with fmb, so4
               1. chain a [33781]
               2. chain b [33782]
               3. chain c [33783]
            10. 1pr0
                complexed with nos, po4
                1. chain a [95042]
                2. chain b [95043]
                3. chain c [95044]
            11. 1pr1
                complexed with fmb, po4
                1. chain a [95045]
                2. chain b [95046]
                3. chain c [95047]
            12. 1pk7
                complexed with adn, po4
                1. chain a [94804]
                2. chain b [94805]
                3. chain c [94806]
            13. 1oty
                complexed with 6mp, po4
                1. chain a [93533]
                2. chain b [93534]
                3. chain c [93535]
            14. 1ou4
                complexed with 6mp, po4
                1. chain a [93540]
                2. chain b [93541]
                3. chain c [93542]
            15. 1oum
                complexed with po4, tal; mutant
                1. chain a [93551]
                2. chain b [93552]
                3. chain c [93553]
            16. 1ov6
                complexed with dbm, po4; mutant
                1. chain a [93583]
                2. chain b [93584]
                3. chain c [93585]
            17. 1pr4
                complexed with mtp, po4
                1. chain a [95051]
                2. chain b [95052]
                3. chain c [95053]
            18. 1pr5
                complexed with po4, tbn
                1. chain a [95054]
                2. chain b [95055]
                3. chain c [95056]
            19. 1otx
                complexed with po4; mutant
                1. chain a [93530]
                2. chain b [93531]
                3. chain c [93532]
         4. Vibrio cholerae [TaxId: 666] [102499] (2)
            1. 1vhw
               structural genomics
               complexed with adn
               1. chain a [100706]
               2. chain b [100707]
               3. chain c [100708]
               4. chain d [100709]
               5. chain e [100710]
               6. chain f [100711]
            2. 1vhj
               structural genomics
               1. chain a [100674]
               2. chain b [100675]
               3. chain c [100676]
               4. chain d [100677]
               5. chain e [100678]
               6. chain f [100679]
         5. Cellulomonas sp. [TaxId: 40001] [53173] (2)
            1. 1qe5
               1. chain a [33784]
               2. chain b [33785]
               3. chain c [33786]
            2. 1c3x
               1. chain a [33787]
               2. chain b [33788]
               3. chain c [33789]
         6. Mycobacterium tuberculosis [TaxId: 1773] [64098] (3)
            1. 1g2o
               complexed with imh, po4
               1. chain a [60228]
               2. chain b [60229]
               3. chain c [60230]
            2. 1n3i
               complexed with dih, po4
               1. chain a [91565]
               2. chain b [91566]
               3. chain c [91567]
            3. 1i80
               complexed with 9hx, imr, po4
               1. chain a [61927]
               2. chain b [61928]
               3. chain c [61929]
         7. Thermus thermophilus [TaxId: 274] [89721] (4)
            1. 1odk
               complexed with gol
               1. chain a [86863]
               2. chain b [86864]
               3. chain c [86865]
               4. chain d [86866]
               5. chain e [86867]
               6. chain f [86868]
            2. 1odl
               complexed with cl, gol, so4
               1. chain a [86869]
               2. chain b [86870]
               3. chain c [86871]
               4. chain d [86872]
               5. chain e [86873]
               6. chain f [86874]
            3. 1odi
               complexed with adn, so4
               1. chain a [86851]
               2. chain b [86852]
               3. chain c [86853]
               4. chain d [86854]
               5. chain e [86855]
               6. chain f [86856]
            4. 1odj
               complexed with gmp, so4
               1. chain a [86857]
               2. chain b [86858]
               3. chain c [86859]
               4. chain d [86860]
               5. chain e [86861]
               6. chain f [86862]
         8. Thermotoga maritima [TaxId: 2336] [117654] (1)
            SQ Q9X1T2
            1. 1vmk
               Structural genomics target
               complexed with gun, mg
               1. chain a [113680]
               2. chain b [113681]
               3. chain c [113682]
         9. Bacillus anthracis [TaxId: 1392] [117655] (3)
            SQ Q81T09
            1. 2ac7
               automatically matched to d1xe3d_
               complexed with adn, so4
               1. region a:2-232 [126543]
            2. 2ac7
               automatically matched to d1xe3d_
               complexed with adn, so4
               1. region b:2-232 [126544]
            3. 1xe3
               complexed with cl
               1. chain a [115207]
               2. chain b [115208]
               3. chain c [115209]
               4. chain d [115210]
               5. chain e [115211]
               6. chain f [115212]
      2. Uridine phosphorylase [53176]
         1. Escherichia coli [TaxId: 562] [53177] (40)
            also includes the PDB entry (1rxs) where protein chains are designated by both upper case and lower case letters creating problems with its processing and presentation in SCOP
            1. 1rxy
               complexed with act, gol, k, so4
               1. chain a [98065]
               2. chain b [98066]
            2. 1lx7
               complexed with mse
               1. chain a [74329]
               2. chain b [74330]
            3. 1tgy
               automatically matched to d1k3fa_
               complexed with k, r1p, ura
               1. region a:4-253 [119249]
            4. 1tgy
               automatically matched to d1k3fa_
               complexed with k, r1p, ura
               1. region b:4-253 [119250]
            5. 1t0u
               1. chain a [99064]
               2. chain b [99065]
            6. 1u1g
               automatically matched to d1k3fa_
               complexed with bbb, k
               1. region a:4-253 [119445]
            7. 1u1g
               automatically matched to d1k3fa_
               complexed with bbb, k
               1. region b:4-253 [119446]
            8. 1u1g
               automatically matched to d1k3fa_
               complexed with bbb, k
               1. region c:4-253 [119447]
            9. 1u1g
               automatically matched to d1k3fa_
               complexed with bbb, k
               1. region d:4-253 [119448]
            10. 1u1g
                automatically matched to d1k3fa_
                complexed with bbb, k
                1. region e:4-253 [119449]
            11. 1u1g
                automatically matched to d1k3fa_
                complexed with bbb, k
                1. region f:4-253 [119450]
            12. 1tgv
                automatically matched to d1k3fa_
                complexed with 5ud, k, so4
                1. region a:4-253 [119247]
            13. 1tgv
                automatically matched to d1k3fa_
                complexed with 5ud, k, so4
                1. region b:4-253 [119248]
            14. 1rxc
                complexed with 5ud, k, po4, r1p, urf
                1. chain a [98015]
                2. chain b [98016]
                3. chain c [98017]
                4. chain d [98018]
                5. chain e [98019]
                6. chain f [98020]
                7. chain g [98021]
                8. chain h [98022]
                9. chain i [98023]
                10. chain j [98024]
                11. chain k [98025]
                12. chain l [98026]
            15. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region a:4-253 [119427]
            16. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region b:4-253 [119428]
            17. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region c:4-253 [119429]
            18. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region d:4-253 [119430]
            19. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region e:4-253 [119431]
            20. 1u1d
                automatically matched to d1k3fa_
                complexed with 181, k, po4
                1. region f:4-253 [119432]
            21. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region a:4-253 [119433]
            22. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region b:4-253 [119434]
            23. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region c:4-253 [119435]
            24. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region d:4-253 [119436]
            25. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region e:4-253 [119437]
            26. 1u1e
                automatically matched to d1k3fa_
                complexed with 182, k, po4
                1. region f:4-253 [119438]
            27. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region a:4-253 [119439]
            28. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region b:4-253 [119440]
            29. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region c:4-253 [119441]
            30. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region d:4-253 [119442]
            31. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region e:4-253 [119443]
            32. 1u1f
                automatically matched to d1k3fa_
                complexed with 183, k, po4
                1. region f:4-253 [119444]
            33. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region a:4-253 [119421]
            34. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region b:4-253 [119422]
            35. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region c:4-253 [119423]
            36. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region d:4-253 [119424]
            37. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region e:4-253 [119425]
            38. 1u1c
                automatically matched to d1k3fa_
                complexed with bau, k, po4
                1. region f:4-253 [119426]
            39. 1rxu
                complexed with k, po4, thm
                1. chain a [98037]
                2. chain b [98038]
                3. chain c [98039]
                4. chain d [98040]
                5. chain e [98041]
                6. chain f [98042]
                7. chain g [98043]
                8. chain h [98044]
                9. chain i [98045]
                10. chain j [98046]
                11. chain k [98047]
                12. chain l [98048]
                13. chain m [98049]
                14. chain n [98050]
                15. chain o [98051]
                16. chain p [98052]
                17. chain q [98053]
                18. chain r [98054]
            40. 1k3f
                1. chain a [68105]
                2. chain b [68106]
                3. chain c [68107]
                4. chain d [68108]
                5. chain e [68109]
                6. chain f [68110]
         2. Salmonella typhimurium [TaxId: 90371] [117656] (1)
            SQ P0A1F6
            1. 1ryz
               complexed with acy
               1. chain a [111975]
               2. chain b [111976]
               3. chain c [111977]
               4. chain d [111978]
               5. chain e [111979]
               6. chain f [111980]
      3. Putative uridine phosphorylase [102500]
         1. Plasmodium falciparum [TaxId: 5833] [102501] (4)
            1. 1q1g
               complexed with ioh, mti, so4
               1. chain a [95574]
               2. chain b [95575]
               3. chain c [95576]
               4. chain d [95577]
               5. chain e [95578]
               6. chain f [95579]
            2. 1nw4
               complexed with imh, ioh, so4
               1. chain a [92223]
               2. chain b [92224]
               3. chain c [92225]
               4. chain d [92226]
               5. chain e [92227]
               6. chain f [92228]
            3. 1sq6
               complexed with so4
               1. chain a [98964]
            4. 2bsx
               automatically matched to d1nw4a_
               complexed with nos
               1. region a:3-245 [129128]
      4. 5'-deoxy-5'-methylthioadenosine phosphorylase [53174]
         1. Human (Homo sapiens) [TaxId: 9606] [53175] (5)
            SQ Q13126
            1. 1cb0
               complexed with ade; mutant
               1. chain a [33790]
            2. 1cg6
               complexed with mta, so4; mutant
               1. chain a [33791]
            3. 1k27
               complexed with mtm, po4
               1. chain a [90926]
            4. 1sd1
               complexed with fmc
               1. chain a [105426]
            5. 1sd2
               complexed with mth, so4
               1. chain a [105427]
         2. Archaeon Sulfolobus solfataricus [TaxId: 2287] [69536] (9)
            1. 1je0
               complexed with po4, trs
               1. chain a [66581]
               2. chain b [66582]
               3. chain c [66583]
            2. 1jds
               complexed with po4, trs
               1. chain a [66560]
               2. chain b [66561]
               3. chain c [66562]
               4. chain d [66563]
               5. chain e [66564]
               6. chain f [66565]
            3. 1je1
               complexed with gmp, so4
               1. chain a [66584]
               2. chain b [66585]
               3. chain c [66586]
               4. chain d [66587]
               5. chain e [66588]
               6. chain f [66589]
            4. 1jpv
               complexed with so4
               1. chain a [67056]
               2. chain b [67057]
               3. chain c [67058]
            5. 1jp7
               complexed with so4
               1. chain a [67006]
               2. chain b [67007]
               3. chain c [67008]
            6. 1jdv
               complexed with adn, so4
               1. chain a [66572]
               2. chain b [66573]
               3. chain c [66574]
               4. chain d [66575]
               5. chain e [66576]
               6. chain f [66577]
            7. 1jdt
               complexed with mta, so4
               1. chain a [66566]
               2. chain b [66567]
               3. chain c [66568]
            8. 1jdz
               complexed with fmb, so4
               1. chain a [66578]
               2. chain b [66579]
               3. chain c [66580]
            9. 1jdu
               1. chain a [66569]
               2. chain b [66570]
               3. chain c [66571]
         3. Sulfolobus tokodaii [TaxId: 111955] [117657] (1)
            SQ Q975C3
            1. 1v4n
               structural genomics target
               1. chain a [113530]
               2. chain b [113531]
               3. chain c [113532]
      5. 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase [82448]
         1. Escherichia coli [TaxId: 562] [82449] (8)
            1. 1jys
               complexed with ade
               1. chain a [77216]
               2. chain b [77217]
            2. 1z5p
               automatically matched to d1nc3a_
               complexed with gol, ipa, pe5
               1. region a:1-232 [124487]
            3. 1nc1
               complexed with mth
               1. chain a [91779]
               2. chain b [91780]
            4. 1nc3
               complexed with fmc
               1. chain a [85546]
               2. chain b [85547]
            5. 1y6r
               automatically matched to d1nc3a_
               complexed with mtm
               1. region a:-1-232 [122672]
            6. 1y6r
               automatically matched to d1nc3a_
               complexed with mtm
               1. region b:1-232 [122673]
            7. 1y6q
               automatically matched to d1nc3a_
               complexed with cl, tdi
               1. region a:-1-232 [122670]
            8. 1y6q
               automatically matched to d1nc3a_
               complexed with cl, tdi
               1. region b:1-232 [122671]
      6. AMP nucleosidase [110645]
         contains extra N-terminal oligomerisation (sub)domain (8-153)
         1. Escherichia coli [TaxId: 562] [110646] (4)
            SQ P15272
            1. 1t8s
               complexed with fmp
               1. chain a [106679]
               2. chain b [106680]
               3. chain c [106681]
               4. chain d [106682]
               5. chain e [106683]
               6. chain f [106684]
            2. 1t8r
               1. chain a [106673]
               2. chain b [106674]
               3. chain c [106675]
               4. chain d [106676]
               5. chain e [106677]
               6. chain f [106678]
            3. 1t8w
               1. chain a [106689]
               2. chain b [106690]
               3. chain c [106691]
               4. chain d [106692]
               5. chain e [106693]
               6. chain f [106694]
            4. 1t8y
               complexed with po4
               1. chain a [106695]
               2. chain b [106696]
               3. chain c [106697]
               4. chain d [106698]
               5. chain e [106699]
               6. chain f [106700]
         2. Bacteroides thetaiotaomicron [TaxId: 818] [117658] (1)
            SQ Q7MVU1
            1. 1ybf
               Structural genomics target
               1. chain a [116609]
               2. chain b [116610]
               3. chain c [116611]
3. Peptidyl-tRNA hydrolase-like [53178] (1)
   uperfamily
   1. Peptidyl-tRNA hydrolase-like [53179] (2)
      1. Peptidyl-tRNA hydrolase [53180]
         1. Escherichia coli [TaxId: 562] [53181] (1)
            1. 2pth
               1. chain a [33793]
      2. Chloroplast group II intron splicing factor Crs2 [102502]
         1. Maize (Zea mays) [TaxId: 4577] [102503] (3)
            1. 1ryb
               mutant
               1. chain a [98098]
            2. 1rym
               mutant
               1. chain a [98106]
            3. 1ryn
               mutant
               1. chain a [98107]
4. Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) [53182] (1)
   uperfamily
   1. Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) [53183] (4)
      1. Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) [53184]
         1. Archaeon Thermococcus litoralis [TaxId: 2265] [53185] (1)
            1. 1a2z
               complexed with so4
               1. chain a [33794]
               2. chain b [33795]
               3. chain c [33796]
               4. chain d [33797]
         2. Bacillus amyloliquefaciens [TaxId: 1390] [53186] (1)
            1. 1aug
               1. chain a [33798]
               2. chain b [33799]
               3. chain c [33800]
               4. chain d [33801]
         3. Archaeon Pyrococcus furiosus [TaxId: 2261] [64099] (2)
            1. 1iof
               mutant
               1. chain a [62625]
               2. chain b [62626]
               3. chain c [62627]
               4. chain d [62628]
            2. 1ioi
               mutant
               1. chain a [62629]
               2. chain b [62630]
               3. chain c [62631]
               4. chain d [62632]
         4. Archaeon Pyrococcus horikoshii [TaxId: 53953] [75246] (1)
            1. 1iu8
               1. chain a [71436]
               2. chain b [71437]
5. Zn-dependent exopeptidases [53187] (9)
   core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
   uperfamily
   1. Pancreatic carboxypeptidases [53188] (10)
      1. Carboxypeptidase A [53189]
         1. Cow (Bos taurus) [TaxId: 9913] [53190] (30)
            1. 1m4l
               high resolution structure
               complexed with zn
               1. chain a [78604]
            2. 2ctb
               complexed with zn
               1. chain a [33803]
            3. 2ctc
               complexed with lof, zn
               1. chain a [33802]
            4. 1yme
               complexed with zn
               1. chain a [33804]
            5. 1f57
               complexed with zn
               1. chain a [33805]
            6. 1zlh
               automatically matched to d1arl__
               complexed with zn
               1. region a:3-305 [125251]
            7. 1ee3
               complexed with cd
               1. chain p [70128]
            8. 1bav
               complexed with bip, zn
               1. chain a [33806]
               2. chain b [33807]
               3. chain c [33808]
               4. chain d [33809]
            9. 1ell
               complexed with cd
               1. chain p [70129]
            10. 2rfh
                automatically matched to d1arla_
                complexed with 23n, zn
                1. region a:1-307 [151995]
            11. 1hee
                complexed with lhy, zn
                1. chain a [65814]
                2. chain b [65815]
                3. chain d [65816]
                4. chain e [65817]
            12. 1hdu
                complexed with ing, zn
                1. chain a [65810]
                2. chain b [65811]
                3. chain d [65812]
                4. chain e [65813]
            13. 1arm
                complexed with cu, hg, trs
                1. chain a [33810]
            14. 1elm
                complexed with cd
                1. chain p [70130]
            15. 5cpa
                complexed with zn
                1. chain a [33811]
            16. 1iy7
                complexed with cxa, zn
                1. chain a [76942]
            17. 1arl
                1. chain a [33812]
            18. 1hdq
                complexed with inf, zn
                1. chain a [65809]
            19. 1cbx
                complexed with bzs, zn
                1. chain a [33813]
            20. 6cpa
                complexed with zaf, zn
                1. chain a [33816]
            21. 7cpa
                complexed with fvf, zn
                1. chain a [33815]
            22. 8cpa
                complexed with agf, zn
                1. chain a [33817]
            23. 2abz
                automatically matched to d1arl__
                complexed with zn; mutant
                1. region a:4-305 [126537]
            24. 2abz
                automatically matched to d1arl__
                complexed with zn; mutant
                1. region b:3-305 [126538]
            25. 1cps
                complexed with cpm, zn
                1. chain a [33818]
            26. 3cpa
                complexed with zn
                1. chain a [33819]
            27. 1pyt
                complexed with ca, zn
                1. chain b [33820]
            28. 4cpa
                complexed with zn
                1. chain a [33821]
            29. 4cpa
                duplicate of 4CPA
                complexed with zn
                1. chain b [118682]
            30. 1cpx
                truncated beta form with two zinc ions in the active site
                complexed with oh, zn
                1. chain a [33814]
         2. Pig (Sus scrofa) [TaxId: 9823] [53191] (1)
            1. 1pca
               zymogen
               complexed with cit, zn
               1. region b:1-308 [33822]
         3. Human (Homo sapiens) [TaxId: 9606] [53192] (7)
            1. 2bo9
               Procarboxypeptidase A4
               complexed with acn, mpd, nag, val, zn
               1. region a:4-307 [128897]
            2. 2bo9
               automatically matched to 2BO9 A:4-307
               complexed with acn, mpd, nag, val, zn
               1. region c:4-307 [128900]
            3. 2pcu
               automatically matched to 2BO9 A:4-307
               complexed with asp, gol, nag, scn, zn
               1. region a:5-307 [139655]
            4. 1dtd
               complexed with glu, zn
               1. chain a [33823]
            5. 1aye
               procarboxypeptidase A2
               complexed with zn
               1. region a:1-309 [33824]
            6. 2boa
               Procarboxypeptidase A4
               complexed with gol, nag, zn
               1. region a:1001-1309 [128903]
            7. 2boa
               automatically matched to 2BOA A:1001-1309
               complexed with gol, nag, zn
               1. region b:1001-1309 [128905]
         4. Cotton bollworm (Helicoverpa armigera) [TaxId: 29058] [75247] (1)
            1. 1jqg
               complexed with zn
               1. region a:1-310 [71791]
      2. Carboxypeptidase B [53193]
         1. Pig (Sus scrofa) [TaxId: 9823] [53194] (54)
            1. 1z5r
               complexed with zn
               1. region a:6-308 [124488]
            2. 1z5r
               automatically matched to 1Z5R A:6-308
               complexed with zn
               1. region b:6-308 [124489]
            3. 1z5r
               automatically matched to 1Z5R A:6-308
               complexed with zn
               1. region c:6-308 [124490]
            4. 2piy
               automatically matched to d1z5ra1
               complexed with 528, zn
               1. region a:6-308 [149522]
            5. 2piy
               automatically matched to d1z5ra1
               complexed with 528, zn
               1. region b:6-308 [149523]
            6. 2piy
               automatically matched to d1z5ra1
               complexed with 528, zn
               1. region c:6-308 [149524]
            7. 2jew
               automatically matched to d1z5ra1
               complexed with 720, zn
               1. region a:6-308 [148025]
            8. 2pj1
               automatically matched to d1z5ra1
               complexed with 578, zn
               1. region a:6-308 [149531]
            9. 2pj1
               automatically matched to d1z5ra1
               complexed with 578, zn
               1. region b:6-308 [149532]
            10. 2pj1
                automatically matched to d1z5ra1
                complexed with 578, zn
                1. region c:6-308 [149533]
            11. 2pj5
                automatically matched to d1z5ra1
                complexed with 11b, zn
                1. region a:6-308 [149542]
            12. 2pj5
                automatically matched to d1z5ra1
                complexed with 11b, zn
                1. region b:6-308 [149543]
            13. 2pj5
                automatically matched to d1z5ra1
                complexed with 11b, zn
                1. region c:6-308 [149544]
            14. 2pj3
                automatically matched to d1z5ra1
                complexed with 86a, zn
                1. region a:6-308 [149537]
            15. 2pj3
                automatically matched to d1z5ra1
                complexed with 86a, zn
                1. region b:6-308 [149538]
            16. 2pj3
                automatically matched to d1z5ra1
                complexed with 86a, zn
                1. region c:6-308 [149539]
            17. 2pj9
                automatically matched to d1z5ra1
                complexed with 281, zn
                1. region a:6-308 [149552]
            18. 2pjb
                automatically matched to d1z5ra1
                complexed with 983, zn
                1. region a:6-308 [149556]
            19. 2pjb
                automatically matched to d1z5ra1
                complexed with 983, zn
                1. region b:6-308 [149557]
            20. 2pjb
                automatically matched to d1z5ra1
                complexed with 983, zn
                1. region c:6-308 [149558]
            21. 2pj8
                automatically matched to d1z5ra1
                complexed with 17a, zn
                1. region a:6-308 [149549]
            22. 2pj8
                automatically matched to d1z5ra1
                complexed with 17a, zn
                1. region b:6-308 [149550]
            23. 2pj8
                automatically matched to d1z5ra1
                complexed with 17a, zn
                1. region c:6-308 [149551]
            24. 2pja
                automatically matched to d1z5ra1
                complexed with 33z, zn
                1. region a:6-308 [149553]
            25. 2pja
                automatically matched to d1z5ra1
                complexed with 33z, zn
                1. region b:6-308 [149554]
            26. 2pja
                automatically matched to d1z5ra1
                complexed with 33z, zn
                1. region c:6-308 [149555]
            27. 2pj6
                automatically matched to d1z5ra1
                complexed with 059, zn
                1. region a:6-308 [149545]
            28. 2pjc
                automatically matched to d1z5ra1
                complexed with 343, zn
                1. region a:6-308 [149559]
            29. 2pjc
                automatically matched to d1z5ra1
                complexed with 343, zn
                1. region b:6-308 [149560]
            30. 2pjc
                automatically matched to d1z5ra1
                complexed with 343, zn
                1. region c:6-308 [149561]
            31. 2pj0
                automatically matched to d1z5ra1
                complexed with 922, zn
                1. region a:6-308 [149528]
            32. 2pj0
                automatically matched to d1z5ra1
                complexed with 922, zn
                1. region b:6-308 [149529]
            33. 2pj0
                automatically matched to d1z5ra1
                complexed with 922, zn
                1. region c:6-308 [149530]
            34. 2pj7
                automatically matched to d1z5ra1
                complexed with 235, zn
                1. region a:6-308 [149546]
            35. 2pj7
                automatically matched to d1z5ra1
                complexed with 235, zn
                1. region b:6-308 [149547]
            36. 2pj7
                automatically matched to d1z5ra1
                complexed with 235, zn
                1. region c:6-308 [149548]
            37. 2piz
                automatically matched to d1z5ra1
                complexed with 606, zn
                1. region a:6-308 [149525]
            38. 2piz
                automatically matched to d1z5ra1
                complexed with 606, zn
                1. region b:6-308 [149526]
            39. 2piz
                automatically matched to d1z5ra1
                complexed with 606, zn
                1. region c:6-308 [149527]
            40. 1zg7
                automatically matched to 1Z5R A:6-308
                complexed with p20, zn
                1. region a:6-308 [125014]
            41. 1zg7
                automatically matched to 1Z5R A:6-308
                complexed with p20, zn
                1. region b:6-308 [125015]
            42. 1zg7
                automatically matched to 1Z5R A:6-308
                complexed with p20, zn
                1. region c:6-307 [125016]
            43. 2pj2
                automatically matched to d1z5ra1
                complexed with 864, zn
                1. region a:6-308 [149534]
            44. 2pj2
                automatically matched to d1z5ra1
                complexed with 864, zn
                1. region b:6-308 [149535]
            45. 2pj2
                automatically matched to d1z5ra1
                complexed with 864, zn
                1. region c:6-308 [149536]
            46. 2pj4
                automatically matched to d1z5ra1
                complexed with 414, zn
                1. region a:6-308 [149540]
            47. 2pj4
                automatically matched to d1z5ra1
                complexed with 414, zn
                1. region b:6-308 [149541]
            48. 1zg9
                automatically matched to 1Z5R A:6-308
                complexed with l06, zn
                1. region a:6-308 [125020]
            49. 1zg9
                automatically matched to 1Z5R A:6-308
                complexed with l06, zn
                1. region b:6-308 [125021]
            50. 1zg9
                automatically matched to 1Z5R A:6-308
                complexed with l06, zn
                1. region c:6-307 [125022]
            51. 1zg8
                automatically matched to 1Z5R A:6-308
                complexed with l98, zn
                1. region a:6-308 [125017]
            52. 1zg8
                automatically matched to 1Z5R A:6-308
                complexed with l98, zn
                1. region b:6-308 [125018]
            53. 1zg8
                automatically matched to 1Z5R A:6-308
                complexed with l98, zn
                1. region c:6-308 [125019]
            54. 1nsa
                zymogen
                complexed with ben, zn
                1. region a:4-308 [33825]
         2. Human (Homo sapiens) [TaxId: 9606] [75248] (2)
            1. 1kwm
               zymogen
               complexed with cit, zn
               1. region a:4-309 [73079]
               2. region b:4-309 [73081]
            2. 1zli
               complexed with zn
               1. region a:5-309 [125252]
         3. Cow (Bos taurus) [TaxId: 9913] [53195] (1)
            1. 1cpb
               CA-atoms only
               1. chain a,b [33826]
         4. Corn earworm (Helicoverpa zea) [TaxId: 7113] [142511] (2)
            SQ Q3T905 117-428
            1. 2c1c
               complexed with y1, zn
               1. region a:7-309 [129630]
            2. 2c1c
               automatically matched to 2C1C A:7-309
               complexed with y1, zn
               1. region b:7-309 [129631]
      3. Carboxypeptidase D, catalytic domain [53196]
         1. Crested duck (Lophonetta specularioides) [TaxId: 8836] [53197] (2)
            1. 1h8l
               complexed with gem, man, nag, so4, zn
               1. region a:4-304 [65738]
            2. 1qmu
               complexed with man, nag, so4, zn
               1. region a:4-304 [33827]
      4. Carboxypeptidase M, catalytic domain [102504]
         1. Human (Homo sapiens) [TaxId: 9606] [102505] (1)
            1. 1uwy
               complexed with nag, zn
               1. region a:1-296 [100131]
   2. Carboxypeptidase T [53198] (1)
      1. Carboxypeptidase T [53199]
         1. Thermoactinomyces vulgaris [TaxId: 2026] [53200] (1)
            1. 1obr
               complexed with ca, so4, zn
               1. chain a [33828]
   3. Leucine aminopeptidase, C-terminal domain [53201] (2)
      1. Leucine aminopeptidase, C-terminal domain [53202]
         1. Cow (Bos taurus) [TaxId: 9913] [53203] (9)
            1. 1lam
               complexed with co3, mpd, zn
               1. region a:160-484 [33829]
            2. 1lcp
               complexed with mpd, plu, zn
               1. region a:160-484 [33830]
               2. region b:160-484 [33831]
            3. 2j9a
               automatically matched to d1blle2
               complexed with ahy, cl, dms, mpd, zn
               1. region a:160-484 [138149]
            4. 2ewb
               automatically matched to d1blle2
               complexed with co3, mpd, na, zed, zn
               1. region a:160-484 [132452]
            5. 1lan
               complexed with mpd, zn
               1. region a:160-484 [33832]
            6. 1bll
               complexed with zn
               1. region e:160-484 [33833]
            7. 1lap
               complexed with zn
               1. region a:160-484 [33834]
            8. 1bpn
               complexed with zn
               1. region a:160-484 [33836]
            9. 1bpm
               complexed with mg, zn
               1. region a:160-484 [33835]
         2. Escherichia coli, PepA [TaxId: 562] [75249] (1)
            1. 1gyt
               complexed with cl, co3, zn
               1. region a:179-503 [70766]
               2. region b:179-503 [70768]
               3. region c:179-503 [70770]
               4. region d:179-503 [70772]
               5. region e:179-503 [70774]
               6. region f:179-503 [70776]
               7. region g:179-503 [70778]
               8. region h:179-503 [70780]
               9. region i:179-503 [70782]
               10. region j:179-503 [70784]
               11. region k:179-503 [70786]
               12. region l:179-503 [70788]
   4. Bacterial dinuclear zinc exopeptidases [53204] (19)
      1. Aminopeptidase [53205]
         1. Aeromonas proteolytica [TaxId: 671] [53206] (13)
            SQ Q01693
            synonym: Vibrio proteolyticus
            1. 1rtq
               complexed with na, scn, zn
               1. chain a [97819]
            2. 1lok
               complexed with na, scn, trs, zn
               1. chain a [78122]
            3. 2dea
               automatically matched to d1amp__
               complexed with na, zn
               1. region a:1-291 [131429]
            4. 1amp
               complexed with zn
               1. chain a [33837]
            5. 2anp
               complexed with na, zn; mutant
               1. region a:1-291 [127056]
            6. 1xry
               automatically matched to d1amp__
               complexed with bes, zn
               1. region a:1-291 [122268]
            7. 1cp6
               complexed with bub, zn
               1. chain a [33838]
            8. 2iq6
               automatically matched to d1ampa_
               complexed with zn
               1. region a:1-291 [147771]
            9. 1txr
               complexed with bes, zn
               1. chain a [107430]
            10. 1igb
                complexed with ipo, zn
                1. chain a [33839]
            11. 1ft7
                complexed with k, plu, zn
                1. chain a [33840]
            12. 2nyq
                automatically matched to d1ampa_
                complexed with zn
                1. region a:1-291 [148517]
            13. 2prq
                automatically matched to d1amp__
                complexed with co, trs
                1. region a:1-291 [139750]
         2. Streptomyces griseus [TaxId: 1911] [53207] (11)
            1. 1tkj
               automatically matched to d1cp7a_
               complexed with ca, med, zn
               1. region a:1-277 [119296]
            2. 1xbu
               automatically matched to d1cp7a_
               complexed with ca, ioy, zn
               1. region a:1-277 [121841]
            3. 1tkf
               automatically matched to d1cp7a_
               complexed with ca, zn
               1. region a:1-277 [119294]
            4. 1tkh
               automatically matched to d1cp7a_
               complexed with ca, zn
               1. region a:1-277 [119295]
            5. 1tf9
               automatically matched to d1cp7a_
               complexed with ca, zn
               1. region a:1-277 [119231]
            6. 1tf8
               automatically matched to d1cp7a_
               complexed with ca, trp, zn
               1. region a:1-277 [119230]
            7. 1qq9
               complexed with ca, met, zn
               1. chain a [33841]
            8. 1cp7
               complexed with ca, zn
               1. chain a [33842]
            9. 1f2o
               complexed with ca, leu, zn
               1. chain a [59625]
            10. 1xjo
                complexed with ca, mho, po4, zn
                1. chain a [33843]
            11. 1f2p
                complexed with ca, phe, zn
                1. chain a [59626]
      2. Aminopeptidase PepV [82450]
         unspecific amino dipeptidase
         1. Lactobacillus delbrueckii [TaxId: 1584] [82451] (1)
            1. 1lfw
               complexed with aep, zn
               1. region a:1-186,a:383-468 [77942]
      3. Carboxypeptidase G2, catalytic domain [53208]
         1. Pseudomonas sp., strain rs-16 [TaxId: 306] [53209] (1)
            1. 1cg2
               complexed with zn
               1. region a:26-213,a:327-414 [33844]
               2. region b:26-213,b:327-414 [33845]
               3. region c:26-213,c:327-414 [33846]
               4. region d:26-213,d:327-414 [33847]
      4. Peptidase T (tripeptidase), catalytic domain [75250]
         1. Salmonella typhimurium [TaxId: 90371] [75251] (1)
            1. 1fno
               complexed with mse, so4, zn2
               1. region a:1-207,a:321-408 [75841]
         2. Escherichia coli [TaxId: 562] [102506] (1)
            1. 1vix
               structural genomics
               complexed with so4, zn
               1. region a:-1-207,a:321-409 [100777]
               2. region b:-1-207,b:321-408 [100779]
      5. Peptidase-like beta-alanine synthase, catalytic domain [102507]
         1. Yeast (Saccharomyces kluyveri) [TaxId: 4934] [102508] (2)
            1. 1r3n
               complexed with bib, zn
               1. region a:18-247,a:364-455 [96945]
               2. region b:23-247,b:364-455 [96947]
               3. region c:18-247,c:364-455 [96949]
               4. region d:19-247,d:364-455 [96951]
               5. region e:23-247,e:364-455 [96953]
               6. region f:18-247,f:364-455 [96955]
               7. region g:26-247,g:364-455 [96957]
               8. region h:18-247,h:364-455 [96959]
            2. 1r43
               complexed with bib, dtt, trs, zn
               1. region a:18-247,a:364-455 [96969]
               2. region b:24-247,b:364-455 [96971]
      6. Succinyl-diaminopimelate desuccinylase, catalytic domain [102509]
         1. Neisseria meningitidis [TaxId: 487] [102510] (1)
            1. 1vgy
               structural genomics
               mutant
               1. region a:2-180,a:294-376 [100620]
               2. region b:2-180,b:294-376 [100622]
      7. Aminoacylase-1, catalytic domain [102511]
         1. Human (Homo sapiens) [TaxId: 9606] [102512] (1)
            1. 1q7l
               catalytic domain only made of the two separate chains
               complexed with gly, zn; mutant
               1. chain a,b [96044]
               2. chain c,d [96045]
      8. Hypothetical protein YsdC, catalytic domain [102513]
         contains insert beta-barrel domain
         1. Bacillus subtilis [TaxId: 1423] [102514] (1)
            1. 1vhe
               structural genomics
               complexed with zn
               1. region a:3-72,a:163-367 [100670]
      9. Putative endoglucanase TM1048, catalytic domain [102515]
         contains insert beta-barrel domain
         1. Thermotoga maritima [TaxId: 2336] [102516] (1)
            1. 1vho
               structural genomics
               complexed with cac, so4
               1. region a:3-69,a:153-333 [100695]
      10. Frv operon protein FrvX, catalytic domain [117659]
          1. Pyrococcus horikoshii [TaxId: 53953] [117660] (3)
             SQ O59196 # PH1527
             1. 1y0y
                automatically matched to 1Y0R A:164-351,A:6-72
                complexed with ati, zn
                1. region a:164-351,a:6-72 [122515]
             2. 1y0r
                complexed with ars, zn
                1. region a:164-351,a:6-72 [122511]
             3. 1xfo
                complexed with zn
                1. region a:6-72,a:164-353 [115266]
                2. region b:6-72,b:164-353 [115268]
                3. region c:6-72,c:164-353 [115270]
                4. region d:6-72,d:164-353 [115272]
      11. Probable aminopeptidase ApeA [117661]
          contains insert beta-barrel domain
          1. Borrelia burgdorferi [TaxId: 139] [117662] (1)
             SQ Q45055
             1. 1y7e
                Structural genomics target; BB0366
                1. region a:4-100,a:234-458 [116533]
      12. IAA-amino acid hydrolase, catalytic domain [117663]
          1. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [117664] (2)
             SQ P54970 37-428
             1. 1xmb
                structural genomics target
                1. region a:37-215,a:335-428 [115479]
             2. 2q43
                automatically matched to d1xmba1
                1. region a:16-194,a:314-407 [139821]
      13. Deblocking aminopeptidase YhfE [142512]
          contains insert beta-barrel domain
          1. Bacillus cereus [TaxId: 1396] [142513] (16)
             SQ Q81HB5 3-73,187-348
             BC0901
             1. 2gre
                complexed with so4
                1. region a:3-73,a:187-348 [135529]
             2. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region b:3-73,b:187-348 [135531]
             3. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region c:3-73,c:187-348 [135533]
             4. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region d:4-73,d:187-348 [135535]
             5. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region e:3-73,e:187-348 [135537]
             6. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region f:3-73,f:187-348 [135539]
             7. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region g:4-73,g:187-348 [135541]
             8. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region h:3-73,h:187-348 [135543]
             9. 2gre
                automatically matched to 2GRE A:3-73,A:187-348
                complexed with so4
                1. region i:4-73,i:187-348 [135545]
             10. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region j:3-73,j:187-348 [135547]
             11. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region k:3-73,k:187-348 [135549]
             12. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region l:3-73,l:187-348 [135551]
             13. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region m:3-73,m:187-348 [135553]
             14. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region n:3-73,n:187-348 [135555]
             15. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region o:5-73,o:187-348 [135557]
             16. 2gre
                 automatically matched to 2GRE A:3-73,A:187-348
                 complexed with so4
                 1. region p:3-73,p:187-348 [135559]
      14. Allantoate amidohydrolase AllC catalytic domain [142514]
          1. Escherichia coli [TaxId: 562] [142515] (4)
             SQ P77425 2-210,328-411
             1. 1z2l
                complexed with 1al, so4, zn
                1. region a:4-212,a:330-413 [124383]
             2. 1z2l
                automatically matched to 1Z2L A:4-212,A:330-413
                complexed with 1al, so4, zn
                1. region b:4-212,b:330-412 [124385]
             3. 2imo
                automatically matched to 1Z2L A:4-212,A:330-413
                1. region a:4-212,a:330-413 [137515]
             4. 2imo
                automatically matched to 1Z2L A:4-212,A:330-413
                1. region b:4-212,b:330-413 [137517]
      15. Endoglucanase TM1049 [142516]
          1. Thermotoga maritima [TaxId: 2336] [142517] (1)
             SQ Q9X0D9 1-64,149-339
             1. 2fvg
                complexed with edo
                1. region a:1-64,a:149-339 [134202]
      16. Protein YxeP [142518]
          1. Bacillus subtilis [TaxId: 1423] [142519] (2)
             SQ P54955 4-177,293-379
             1. 1ysj
                complexed with ni; mutant
                1. region a:4-177,a:293-379 [123975]
             2. 1ysj
                automatically matched to 1YSJ A:4-177,A:293-379
                complexed with ni; mutant
                1. region b:4-177,b:293-379 [123977]
      17. Aminopeptidase YpdE [142520]
          1. Shigella flexneri [TaxId: 623] [142521] (6)
             SQ Q83K87 1-66,148-345
             hypothetical protein SF2450 (PDB)/SF2449.1 (UniProt)
             1. 1ylo
                complexed with zn
                1. region a:1-66,a:148-345 [123660]
             2. 1ylo
                automatically matched to 1YLO A:1-66,A:148-345
                complexed with zn
                1. region b:1-66,b:148-345 [123662]
             3. 1ylo
                automatically matched to 1YLO A:1-66,A:148-345
                complexed with zn
                1. region c:1-66,c:148-345 [123664]
             4. 1ylo
                automatically matched to 1YLO A:1-66,A:148-345
                complexed with zn
                1. region d:1-66,d:148-345 [123666]
             5. 1ylo
                automatically matched to 1YLO A:1-66,A:148-345
                complexed with zn
                1. region e:1-66,e:148-345 [123668]
             6. 1ylo
                automatically matched to 1YLO A:1-66,A:148-345
                complexed with zn
                1. region f:1-66,f:148-345 [123670]
   5. FolH catalytic domain-like [53210] (2)
      1. Transferrin receptor ectodomain, protease-like domain [53211]
         1. Human (Homo sapiens) [TaxId: 9606] [53212] (4)
            1. 1de4
               1. region c:122-189,c:383-608 [33848]
               2. region f:122-189,f:383-608 [33849]
               3. region i:122-189,i:383-608 [33850]
            2. 1cx8
               complexed with nag, sm
               1. region a:122-189,a:383-608 [33851]
               2. region b:122-189,b:383-608 [33852]
               3. region c:122-189,c:383-608 [33853]
               4. region d:122-189,d:383-608 [33854]
               5. region e:122-189,e:383-608 [33855]
               6. region f:122-189,f:383-608 [33856]
               7. region g:122-189,g:383-608 [33857]
               8. region h:122-189,h:383-608 [33858]
            3. 2nsu
               automatically matched to d1cx8a3
               1. region a:122-189,a:383-608 [138548]
            4. 2nsu
               automatically matched to d1cx8a3
               1. region b:122-189,b:383-608 [138551]
      2. Glutamate carboxypeptidase II FOLH1 [142522]
         Folate hydrolase 1, FolH homologue
         1. Human (Homo sapiens) [TaxId: 9606] [142523] (17)
            SQ Q04609 57-117,351-593
            1. 3bi1
               automatically matched to d1z8la3
               complexed with 3bi, bma, ca, cl, man, nag, zn
               1. region a:57-117,a:351-593 [155297]
            2. 3bhx
               automatically matched to d1z8la3
               complexed with bhx, bma, ca, cl, man, nag, zn
               1. region a:57-117,a:351-593 [155291]
            3. 2or4
               automatically matched to 2C6C A:57-117,A:351-593
               complexed with bma, ca, cl, man, nag, qus, zn
               1. region a:57-117,a:351-593 [139260]
            4. 3bi0
               automatically matched to d1z8la3
               complexed with bix, bma, ca, cl, man, nag, zn
               1. region a:57-117,a:351-593 [155294]
            5. 2pvw
               automatically matched to 2C6C A:57-117,A:351-593
               complexed with bma, ca, cl, g88, man, nag, zn
               1. region a:57-117,a:351-593 [139757]
            6. 2oot
               automatically matched to 2C6C A:57-117,A:351-593
               complexed with bma, ca, cl, man, nag, zn
               1. region a:57-117,a:351-593 [139178]
            7. 2c6c
               complexed with 24i, ca, cl, man, nag, zn
               1. region a:57-117,a:351-593 [129991]
            8. 2pvv
               automatically matched to 2C6C A:57-117,A:351-593
               complexed with ca, cl, man, nag, ose, zn
               1. region a:57-117,a:351-593 [139754]
            9. 2c6g
               automatically matched to 2C6C A:57-117,A:351-593
               complexed with bma, ca, cl, glu, man, nag, zn
               1. region a:57-117,a:351-593 [129994]
            10. 2jbj
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with bma, ca, cl, g88, man, nag, zn
                1. region a:57-117,a:351-593 [138252]
            11. 2cij
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with bma, ca, cl, man, met, nag, zn
                1. region a:57-117,a:351-593 [130495]
            12. 2c6p
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with bma, ca, cl, nag, po4, zn
                1. region a:57-117,a:351-593 [130003]
            13. 2jbk
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with bma, ca, cl, man, nag, qus, zn
                1. region a:57-117,a:351-593 [138255]
            14. 1z8l
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with nag, ndg, zn
                1. region a:57-117,a:351-593 [124708]
            15. 1z8l
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with nag, ndg, zn
                1. region b:57-117,b:351-593 [124711]
            16. 1z8l
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with nag, ndg, zn
                1. region c:57-117,c:351-593 [124714]
            17. 1z8l
                automatically matched to 2C6C A:57-117,A:351-593
                complexed with nag, ndg, zn
                1. region d:57-117,d:351-593 [124717]
   6. N-acetylmuramoyl-L-alanine amidase-like [102517] (2)
      1. N-acetylmuramoyl-L-alanine amidase CwlV [102518]
         1. Paenibacillus polymyxa [TaxId: 1406] [102519] (1)
            1. 1jwq
               complexed with zn
               1. chain a [90921]
      2. Endolysin Ply, catalytic domain [142524]
         1. Bacteriophage Psa [TaxId: 171618] [142525] (1)
            SQ Q8W5Y8 1-180
            1. 1xov
               complexed with cl, glu, lys, so4, trs, zn
               1. region a:1-180 [122207]
   7. AstE/AspA-like [142526] (6)
      Pfam 04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (scop_cf 51229)
      1. Succinylglutamate desuccinylase AstE [142527]
         1. Vibrio cholerae [TaxId: 666] [142528] (1)
            SQ Q9KSL4 3-342
            1. 2g9d
               1. region a:3-342 [134798]
         2. Vibrio parahaemolyticus [TaxId: 670] [142529] (2)
            SQ Q87Q40 4-342
            1. 2bco
               complexed with zn
               1. region a:4-342 [128302]
            2. 2bco
               automatically matched to 2BCO A:4-342
               complexed with zn
               1. region b:4-342 [128303]
         3. Escherichia coli [TaxId: 562] [142530] (2)
            SQ P76215 1-322
            1. 1yw6
               complexed with so4
               1. region a:1-322 [124132]
            2. 1yw6
               automatically matched to 1YW6 A:1-322
               complexed with so4
               1. region b:1-322 [124133]
         4. Chromobacterium violaceum [TaxId: 536] [142531] (1)
            SQ Q7NU26 2-332
            1. 1yw4
               complexed with zn
               1. region a:2-332 [124131]
      2. Aspartoacylase AspA [159649]
         1. Rat (Rattus norvegicus) [TaxId: 10116] [159650] (1)
            SQ Q6AZ03 4-310
            1. 2gu2
               complexed with so4, zn
               1. region a:4-310 [147177]
         2. Human (Homo sapiens) [TaxId: 9606] [159651] (1)
            SQ P45381 9-310
            1. 2i3c
               complexed with po4, zn
               1. region a:9-310 [147498]
   8. Glutaminyl-peptide cyclotransferase-like [142532] (1)
      part of Pfam 04389
      1. Glutaminyl-peptide cyclotransferase, QPCT [142533]
         Glutaminyl cyclase
         1. Human (Homo sapiens) [TaxId: 9606] [142534] (16)
            SQ Q16769 33-361
            1. 2afw
               automatically matched to 2AFM A:33-361
               complexed with ahn, so4, zn
               1. region a:33-361 [126707]
            2. 2afw
               automatically matched to 2AFM A:33-361
               complexed with ahn, so4, zn
               1. region b:33-361 [126708]
            3. 2afx
               automatically matched to 2AFM A:33-361
               complexed with 1bn, so4, zn
               1. region a:33-361 [126709]
            4. 2afx
               automatically matched to 2AFM A:33-361
               complexed with 1bn, so4, zn
               1. region b:33-361 [126710]
            5. 2afm
               complexed with so4, zn
               1. region a:33-361 [126698]
            6. 2afm
               automatically matched to 2AFM A:33-361
               complexed with so4, zn
               1. region b:33-361 [126699]
            7. 2afz
               automatically matched to 2AFM A:33-361
               complexed with nvi, so4, zn
               1. region a:33-361 [126712]
            8. 2afz
               automatically matched to 2AFM A:33-361
               complexed with nvi, so4, zn
               1. region b:33-361 [126713]
            9. 2zeh
               automatically matched to d2afua1
               complexed with so4, zn; mutant
               1. region a:33-361 [154403]
            10. 2zeh
                automatically matched to d2afua1
                complexed with so4, zn; mutant
                1. region b:33-361 [154404]
            11. 2afs
                complexed with so4, zn; mutant
                1. region a:33-361 [126702]
            12. 2afu
                complexed with bgt, zn
                1. region a:33-361 [126705]
            13. 2afs
                automatically matched to 2AFS A:33-361
                complexed with so4, zn; mutant
                1. region b:33-361 [126703]
            14. 2afu
                automatically matched to 2AFU A:33-361
                complexed with bgt, zn
                1. region b:33-361 [126706]
            15. 2afo
                automatically matched to 2AFM A:33-361
                complexed with so4, zn
                1. region a:33-361 [126700]
            16. 2afo
                automatically matched to 2AFM A:33-361
                complexed with so4, zn
                1. region b:33-361 [126701]
   9. FGase-like [159652] (2)
      Pfam 05013; N-formylglutamate amidohydrolase
      1. N-formylglutamate amidohydrolase [159653]
         1. Ralstonia eutropha [TaxId: 106590] [159654] (2)
            SQ Q46VW8 10-289
            1. 2q7s
               complexed with zn
               1. region a:10-289 [150103]
            2. 2q7s
               automatically matched to 2Q7S A:10-289
               complexed with zn
               1. region b:10-289 [150104]
      2. Hypothetical protein Atu2144 [159655]
         1. Agrobacterium tumefaciens [TaxId: 358] [159656] (8)
            SQ Q8UDI1 6-257
            1. 2odf
               complexed with so4
               1. region a:6-257 [148741]
            2. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region b:6-256 [148742]
            3. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region c:7-255 [148743]
            4. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region d:7-256 [148744]
            5. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region e:6-256 [148745]
            6. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region f:6-256 [148746]
            7. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region g:7-256 [148747]
            8. 2odf
               automatically matched to 2ODF A:6-257
               complexed with so4
               1. region h:6-256 [148748]
6. LigB-like [53213] (1)
   circular permutation of the common fold, most similar to the PNP fold
   uperfamily
   1. LigB-like [53214] (2)
      1. LigB subunit of an aromatic-ring-opening dioxygenase LigAB [53215]
         1. Pseudomonas paucimobilis [TaxId: 13689] [53216] (2)
            1. 1bou
               complexed with fe
               1. chain b [33859]
               2. chain d [33860]
            2. 1b4u
               complexed with dhb, fe
               1. chain b [33861]
               2. chain d [33862]
      2. Uncharacterized protein YgiD [159657]
         1. Escherichia coli [TaxId: 562] [159658] (1)
            SQ P24197 14-271
            1. 2pw6
               complexed with zn
               1. region a:14-271 [149895]
7. AF0625-like [142535] (1)
   contains extra C-terminal alpha/beta domain: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 2134
   uperfamily
   1. AF0625-like [142536] (2)
      Pfam 04414; DUF516, binds magnesium ion and pyrophosphate in the putative active site
      1. Hypothetical protein PH0006 [142537]
         1. Pyrococcus horikoshii [TaxId: 53953] [142538] (3)
            SQ O57774 1-274
            1. 2gfq
               complexed with mg, so4
               1. region a:1-274 [135106]
            2. 2gfq
               automatically matched to 2GFQ A:1-274
               complexed with mg, so4
               1. region b:1-274 [135107]
            3. 2gfq
               automatically matched to 2GFQ A:1-274
               complexed with mg, so4
               1. region c:1-274 [135108]
      2. Hypothetical protein AF0625 [142539]
         1. Archaeoglobus fulgidus [TaxId: 2234] [142540] (1)
            SQ O29630 1-278
            1. 1yqe
               complexed with pop
               1. region a:1-278 [123879]
8. Cgl1923-like [159659] (1)
   1. Cgl1923-like [159660] (1)
      Pfam 01908; DUF75
      1. Hypothetical protein Cgl1923 [159661]
         1. Corynebacterium glutamicum [TaxId: 1718] [159662] (3)
            SQ Q8NP93 6-274
            1. 2p90
               1. region a:6-274 [149317]
            2. 2p90
               automatically matched to 2P90 A:6-274
               1. region b:8-274 [149318]
            3. 2p90
               automatically matched to 2P90 A:6-274
               1. region c:7-274 [149319]