Structural Classification of Proteins
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Superfamily: HybD-like

the HybD fold coincides with the consensus core structure
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Phosphorylase/hydrolase-like [53162]
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. Superfamily: HybD-like [53163]
    the HybD fold coincides with the consensus core structure
    link to SUPERFAMILY database - Superfamily

Families:

  1. Hydrogenase maturating endopeptidase HybD [53164] (1)
    1. Hydrogenase maturating endopeptidase HybD [53165]
      1. Escherichia coli [TaxId: 562] [53166] (1)
        1. 1cfz picpic
          complexed with cd
          1. chain a [33754] picpiclink
          2. chain b [33755] picpiclink
          3. chain c [33756] picpiclink
          4. chain d [33757] picpiclink
          5. chain e [33758] picpiclink
          6. chain f [33759] picpiclink
  2. Germination protease [64095] (1)
    elaborated with the N-terminal alpha+beta subdomain and the insertion all-alpha dimerisation subdomain
    1. Germination protease [64096]
      1. Bacillus megaterium [TaxId: 1404] [64097] (1)
        1. 1c8b picpic
          1. chain a [59082] picpiclink
          2. chain b [59083] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk