Superfamily: PA domain

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: The "swivelling" beta/beta/alpha domain [52008]
   3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
   this domain is thought to be mobile in most multi-domain proteins known to contain it
4. Superfamily: PA domain [52025]
   uperfamily

Families:

1. PA domain [52026] (2)
   1. Transferrin receptor ectodomain, apical domain [52027]
      1. Human (Homo sapiens) [TaxId: 9606] [52028] (4)
         1. 1de4
            1. region c:190-382 [30760]
            2. region f:190-382 [30761]
            3. region i:190-382 [30762]
         2. 1cx8
            complexed with nag, sm
            1. region a:190-382 [30763]
            2. region b:190-382 [30764]
            3. region c:190-382 [30765]
            4. region d:190-382 [30766]
            5. region e:190-382 [30767]
            6. region f:190-382 [30768]
            7. region g:190-382 [30769]
            8. region h:190-382 [30770]
         3. 2nsu
            automatically matched to d1cx8a2
            1. region a:190-382 [138547]
         4. 2nsu
            automatically matched to d1cx8a2
            1. region b:190-382 [138550]
   2. Glutamate carboxypeptidase II [141984]
      1. Human (Homo sapiens) [TaxId: 9606] [141985] (17)
         SQ Q04609 118-350
         1. 3bi1
            automatically matched to d1z8la2
            complexed with 3bi, bma, ca, cl, man, nag, zn
            1. region a:118-350 [155296]
         2. 3bhx
            automatically matched to d1z8la2
            complexed with bhx, bma, ca, cl, man, nag, zn
            1. region a:118-350 [155290]
         3. 2or4
            automatically matched to 2C6C A:118-350
            complexed with bma, ca, cl, man, nag, qus, zn
            1. region a:118-350 [139259]
         4. 3bi0
            automatically matched to d1z8la2
            complexed with bix, bma, ca, cl, man, nag, zn
            1. region a:118-350 [155293]
         5. 2pvw
            automatically matched to 2C6C A:118-350
            complexed with bma, ca, cl, g88, man, nag, zn
            1. region a:118-350 [139756]
         6. 2oot
            automatically matched to 2C6C A:118-350
            complexed with bma, ca, cl, man, nag, zn
            1. region a:118-350 [139177]
         7. 2c6c
            complexed with 24i, ca, cl, man, nag, zn
            1. region a:118-350 [129990]
         8. 2pvv
            automatically matched to 2C6C A:118-350
            complexed with ca, cl, man, nag, ose, zn
            1. region a:118-350 [139753]
         9. 2c6g
            automatically matched to 2C6C A:118-350
            complexed with bma, ca, cl, glu, man, nag, zn
            1. region a:118-350 [129993]
         10. 2jbj
             automatically matched to 2C6C A:118-350
             complexed with bma, ca, cl, g88, man, nag, zn
             1. region a:118-350 [138251]
         11. 2cij
             automatically matched to 2C6C A:118-350
             complexed with bma, ca, cl, man, met, nag, zn
             1. region a:118-350 [130494]
         12. 2c6p
             automatically matched to 2C6C A:118-350
             complexed with bma, ca, cl, nag, po4, zn
             1. region a:118-350 [130002]
         13. 2jbk
             automatically matched to 2C6C A:118-350
             complexed with bma, ca, cl, man, nag, qus, zn
             1. region a:118-350 [138254]
         14. 1z8l
             automatically matched to 2C6C A:118-350
             complexed with nag, ndg, zn
             1. region a:118-350 [124707]
         15. 1z8l
             automatically matched to 2C6C A:118-350
             complexed with nag, ndg, zn
             1. region b:118-350 [124710]
         16. 1z8l
             automatically matched to 2C6C A:118-350
             complexed with nag, ndg, zn
             1. region c:118-350 [124713]
         17. 1z8l
             automatically matched to 2C6C A:118-350
             complexed with nag, ndg, zn
             1. region d:118-350 [124716]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk