Structural Classification of Proteins

Superfamily: Macro domain-like

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: Macro domain-like [52948]
3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
Superfamily: Macro domain-like [52949]
uperfamily

Families:

Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52950] (2)
1. Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52951]
  1. Cow (Bos taurus) [TaxId: 9913] [52952] (9)
    1. 1lam
      complexed with co3, mpd, zn
      1. region a:1-159 [33166]
    2. 1lcp
      complexed with mpd, plu, zn
      1. region a:1-159 [33167]
      2. region b:1-159 [33168]
    3. 2j9a
      automatically matched to d1blle1
      complexed with ahy, cl, dms, mpd, zn
      1. region a:1-159 [138150]
    4. 2ewb
      automatically matched to d1blle1
      complexed with co3, mpd, na, zed, zn
      1. region a:1-159 [132453]
    5. 1lan
      complexed with mpd, zn
      1. region a:1-159 [33169]
    6. 1bll
      complexed with zn
      1. region e:1-159 [33170]
    7. 1lap
      complexed with zn
      1. region a:1-159 [33171]
    8. 1bpn
      complexed with zn
      1. region a:1-159 [33173]
    9. 1bpm
      complexed with mg, zn
      1. region a:1-159 [33172]
  2. Escherichia coli, PepA [TaxId: 562] [75241] (1)
    involved in Xer site-specific recombination; probable DNA-binding domain
    1. 1gyt
      complexed with cl, co3, zn
      1. region a:1-178 [70765]
      2. region b:1-178 [70767]
      3. region c:1-178 [70769]
      4. region d:1-178 [70771]
      5. region e:1-178 [70773]
      6. region f:1-178 [70775]
      7. region g:1-178 [70777]
      8. region h:1-178 [70779]
      9. region i:1-178 [70781]
      10. region j:1-178 [70783]
      11. region k:1-178 [70785]
      12. region l:1-178 [70787]
Macro domain [89724] (7)
found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
1. Hypothetical protein AF1521 [89725]
  contains extra N-terminal strand
  1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [89726] (4)
    SQ O28751
    1. 1vhu
      structural genomics
      complexed with mes
      1. chain a [100703]
    2. 2bfq
      automatically matched to d1hjza_
      complexed with apr
      1. region a:1-192 [128452]
    3. 1hjz
      complexed with mes
      1. chain a [83520]
      2. chain b [83521]
    4. 2bfr
      complexed with adp, mg
      1. chain a [116719]
2. Hypothetical protein YmbD [102530]
  1. Escherichia coli [TaxId: 562] [102531] (1)
    1. 1spv
      structural genomics; NESG target ER58
      complexed with mes
      1. chain a [98957]
3. Hypothetical protein Ymr087W [110654]
  contains structural variations at both termini
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110655] (3)
    SQ Q04299
    1. 1njr
      complexed with xyl
      1. chain a [103858]
    2. 1ty8
      complexed with adp, cl, na
      1. chain a [112826]
    3. 1txz
      complexed with apr, egl, na, so4
      1. chain a [112793]
4. Hypothetical protein BT1257 [142545]
  1. Bacteroides thetaiotaomicron [TaxId: 818] [142546] (3)
    SQ Q8A8B0 2-155
    1. 2fg1
      automatically matched to 2AFC A:2-155
      1. region a:2-155 [133400]
    2. 2afc
      1. region a:2-155 [126676]
    3. 2afc
      automatically matched to 2AFC A:2-155
      1. region b:2-155 [126677]
5. Histone macro-H2a1.1 [142547]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [142548] (4)
    SQ Q02874 180-370
    1. 1yd9
      Isoform 1
      complexed with au
      1. region a:6-193 [122976]
    2. 1yd9
      automatically matched to 1YD9 A:6-193
      complexed with au
      1. region b:6-192 [122977]
    3. 1yd9
      automatically matched to 1YD9 A:6-193
      complexed with au
      1. region c:6-191 [122978]
    4. 1yd9
      automatically matched to 1YD9 A:6-193
      complexed with au
      1. region d:6-193 [122979]
  2. Human (Homo sapiens) [TaxId: 9606] [142549] (8)
    SQ O75367 179-367! SQ O75367 181-371
    1. 1zr3
      automatically matched to 2FXK A:182-368
      complexed with mes
      1. region a:182-367 [125513]
    2. 1zr3
      automatically matched to 2FXK A:182-368
      complexed with mes
      1. region b:182-367 [125514]
    3. 1zr3
      automatically matched to 2FXK A:182-368
      complexed with mes
      1. region c:183-366 [125515]
    4. 1zr3
      automatically matched to 2FXK A:182-368
      complexed with mes
      1. region d:183-366 [125516]
    5. 2fxk
      isoform 1
      mutant
      1. region a:182-368 [134323]
    6. 2fxk
      automatically matched to 2FXK A:182-368
      mutant
      1. region b:182-368 [134324]
    7. 1zr5
      1. region a:179-367 [125525]
    8. 1zr5
      automatically matched to 1ZR5 A:179-367
      1. region b:181-367 [125526]
6. Replicase polyprotein 1ab [142550]
  1. SARS coronavirus [TaxId: 227859] [142551] (4)
    SQ P59641 1002-1169
    1. 2acf
      complexed with gol
      1. region a:184-351 [126547]
    2. 2acf
      automatically matched to 2ACF A:184-351
      complexed with gol
      1. region b:184-351 [126548]
    3. 2acf
      automatically matched to 2ACF A:184-351
      complexed with gol
      1. region c:184-351 [126549]
    4. 2acf
      automatically matched to 2ACF A:184-351
      complexed with gol
      1. region d:184-351 [126550]