Structural Classification of Proteins
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Superfamily: FabD/lysophospholipase-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: FabD/lysophospholipase-like [52150]
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest
  4. Superfamily: FabD/lysophospholipase-like [52151]
    link to SUPERFAMILY database - Superfamily

Families:

  1. FabD-like [52152] (2)
    the superfamily common core covers almost all of the family fold
    1. Catalytic domain of malonyl-CoA ACP transacylase FabD [52153]
      1. Escherichia coli [TaxId: 562] [52154] (1)
        1. 1mla picpicxref
          1. region a:3-127,a:198-307 [31031] picpiclink
      2. Streptomyces coelicolor A3(2) [TaxId: 100226] [82463] (1)
        1. 1nm2 picpicxref
          complexed with acy, ni
          1. region a:0-133,a:196-314 [80654] picpiclink
  2. Lysophospholipase [53645] (1)
    common core is decorated with many additional structures; mixed beta-sheet of 9 strands, order 654321798; strands 4, 6 and 8 are antiparallel to the rest
    1. Cytosolic phospholipase A2 catalytic domain [53646]
      1. Human (Homo sapiens) [TaxId: 9606] [53647] (1)
        1. 1cjy picpicxref
          complexed with ca, mes
          1. region a:142-721 [34986] picpiclink
          2. region b:1142-1717 [34987] picpiclink
  3. Patatin [89729] (1)
    plant proteins; structurally and functionally related to animal cytosolic phospholipase A2
    1. Patatin [89730]
      1. Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510] [89731] (1)
        1. 1oxw picpic
          complexed with mse; mutant
          1. chain a [87539] picpiclink
          2. chain b [87540] picpiclink
          3. chain c [87541] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk