Structural Classification of Proteins
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Family: Pyridoxal-dependent decarboxylase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PLP-dependent transferase-like [53382]
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. Superfamily: PLP-dependent transferases [53383]
    link to SUPERFAMILY database - Superfamily
  5. Family: Pyridoxal-dependent decarboxylase [69565]

Protein Domains:

  1. DOPA decarboxylase [69566]
    1. Pig (Sus scrofa) [TaxId: 9823] [69567] (2)
      1. 1js3 picpic
        complexed with 142, plp, so4
        1. chain a [67215] picpiclink
        2. chain b [67216] picpiclink
      2. 1js6 picpic
        complexed with plp
        1. chain a [67217] picpiclink
        2. chain b [67218] picpiclink
  2. Glutamate decarboxylase beta, GadB [102596]
    1. Escherichia coli [TaxId: 562] [102597] (14)
      1. 1pmm picpic
        complexed with acy, plp
        1. chain a [94901] picpiclink
        2. chain b [94902] picpiclink
        3. chain c [94903] picpiclink
        4. chain d [94904] picpiclink
        5. chain e [94905] picpiclink
        6. chain f [94906] picpiclink
      2. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region a:4-452 [131508] picpiclink
      3. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region b:4-452 [131509] picpiclink
      4. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region c:4-452 [131510] picpiclink
      5. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region d:4-452 [131511] picpiclink
      6. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region e:4-452 [131512] picpiclink
      7. 2dgm picpic
        automatically matched to d1pmob_
        complexed with acy, fmt, iod, peg, plp
        1. region f:4-452 [131513] picpiclink
      8. 1pmo picpic
        complexed with plr, trs
        1. chain a [94908] picpiclink
        2. chain b [94909] picpiclink
        3. chain c [94910] picpiclink
        4. chain d [94911] picpiclink
        5. chain e [94912] picpiclink
        6. chain f [94913] picpiclink
      9. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region a:4-452 [131502] picpiclink
      10. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region b:4-452 [131503] picpiclink
      11. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region c:4-452 [131504] picpiclink
      12. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region d:4-452 [131505] picpiclink
      13. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region e:4-452 [131506] picpiclink
      14. 2dgl picpic
        automatically matched to d1pmob_
        complexed with acy, br, plp
        1. region f:4-452 [131507] picpiclink
  3. Glutamate decarboxylase alpha, GadA [117695]
    1. Escherichia coli [TaxId: 562] [117696] (1)
      SQ P69908
      1. 1xey picpic
        complexed with act, gua, plp
        1. chain a [115237] picpiclink
        2. chain b [115238] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk