Structural Classification of Proteins
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Fold: dsRBD-like

alpha-beta(3)-alpha; 2 layers: alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: dsRBD-like [54767]
    alpha-beta(3)-alpha; 2 layers: alpha/beta

Superfamilies:

  1. dsRNA-binding domain-like [54768] (3)
    link to SUPERFAMILY database - Superfamily
    1. Double-stranded RNA-binding domain (dsRBD) [54769] (15) picpic
      Pfam 00035
    2. The homologous-pairing domain of Rad52 recombinase [82645] (1) picpic
      contains N- and C-terminal extensions to the common fold involved in the oligomerization
    3. Ribosomal S5 protein, N-terminal domain [54778] (3) picpic
  2. Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain [54782] (1)
    link to SUPERFAMILY database - Superfamily
    1. Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain [54783] (1) picpic
  3. YcfA/nrd intein domain [54786] (3)
    link to SUPERFAMILY database - Superfamily
    1. PI-Pfui intein middle domain [54787] (1) picpic
    2. YcfA-like [117905] (1) picpic
      Pfam 07927
    3. YkfF-like [160203] (1) picpic
      Pfam 06006; DUF905
  4. Peptidyl-tRNA hydrolase domain-like [110916] (1)
    link to SUPERFAMILY database - Superfamily
    1. Peptidyl-tRNA hydrolase domain [110917] (1) picpic
      Pfam 00472; related to domain 3 of the Polypeptide chain release factors RF1 and RF2 (scop_fa 75621)
  5. Rv2632c-like [143212] (1)
    lacks the N-terminal helix; dimerises via the N-terminal strand and the C-terminal helix with the formation of a single beta-sheet wrapped around an antiparallel coiled coil
    link to SUPERFAMILY database - Superfamily
    1. Rv2632c-like [143213] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk