Structural Classification of Proteins
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Family: AMPKBI-like

Pfam 04739; 5'-AMP-activated protein kinase, beta subunit, complex-interacting region

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: AMPKBI-like [160218]
    comprises 3 short helices and 3-stranded meander beta-sheet; makes extensive intermolecular interactions
  4. Superfamily: AMPKBI-like [160219]
  5. Family: AMPKBI-like [160220]
    Pfam 04739; 5'-AMP-activated protein kinase, beta subunit, complex-interacting region

Protein Domains:

  1. SIP2 [160221]
    1. Saccharomyces cerevisiae [TaxId: 4932] [160222] (2)
      SQ P34164 306-412
      1. 2qlv picpicxrefxrefxrefxref
        1. region b:306-412 [150868] picpiclink
      2. 2qlv picpicxrefxrefxrefxref
        automatically matched to 2QLV B:306-412
        1. region e:307-412 [150871] picpiclink
  2. 5'-AMP-activated protein kinase subunit beta-2 [160223]
    1. Human (Homo sapiens) [TaxId: 9606] [160224] (3)
      SQ O43741 190-272
      1. 2v8q picpicxrefxrefxref
        complexed with amp
        1. region b:190-272 [152782] picpiclink
      2. 2v92 picpicxrefxrefxref
        automatically matched to 2V8Q B:190-272
        complexed with amp, atp
        1. region b:190-272 [152792] picpiclink
      3. 2v9j picpicxrefxrefxref
        automatically matched to 2V8Q B:190-272
        complexed with amp, atp, mg
        1. region b:190-272 [152806] picpiclink
  3. AMP-activated protein kinase beta subunit [160225]
    1. Schizosaccharomyces pombe [TaxId: 4896] [160226] (12)
      SQ P78789 205-297
      Spcc1919.03c
      1. 2qrd picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp, atp
        1. region b:205-297 [151287] picpiclink
      2. 2qrd picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp, atp
        1. region d:206-297 [151289] picpiclink
      3. 2oox picpicxrefxrefxrefxref
        complexed with amp
        1. region b:205-297 [148941] picpiclink
      4. 2oox picpicxrefxrefxrefxref
        automatically matched to 2OOX B:205-297
        complexed with amp
        1. region d:205-297 [148943] picpiclink
      5. 2qr1 picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp
        1. region b:207-297 [151275] picpiclink
      6. 2qr1 picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp
        1. region d:207-297 [151277] picpiclink
      7. 2qrc picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp, amp
        1. region b:207-297 [151283] picpiclink
      8. 2qrc picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with adp, amp
        1. region d:207-297 [151285] picpiclink
      9. 2qre picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with amz
        1. region b:207-297 [151291] picpiclink
      10. 2qre picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with amz
        1. region d:207-297 [151293] picpiclink
      11. 2ooy picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with atp, flc
        1. region b:206-297 [148947] picpiclink
      12. 2ooy picpicxrefxref
        automatically matched to 2OOX B:205-297
        complexed with atp, flc
        1. region d:207-297 [148949] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk