Structural Classification of Proteins
home mail help root up expand collapse

Fold: Alpha-lytic protease prodomain-like

core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Alpha-lytic protease prodomain-like [54805]
    core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta

Superfamilies:

  1. Alpha-lytic protease prodomain [54806] (1)
    link to SUPERFAMILY database - Superfamily
    1. Alpha-lytic protease prodomain [54807] (1)
      1. Alpha-lytic protease prodomain [54808]
        duplication: consists of two domains of this fold
        1. Lysobacter enzymogenes [TaxId: 69] [54809] (3)
          1. 3pro picpicxref
            complexed with 2ab; mutant
            1. region c:6-85 [38812] picpiclink
            2. region c:86-163 [38813] picpiclink
            3. region d:3-85 [38814] picpiclink
            4. region d:86-163 [38815] picpiclink
          2. 4pro picpicxref
            mutant
            1. region c:6-85 [38816] picpiclink
            2. region c:86-166 [38817] picpiclink
            3. region d:5-85 [38818] picpiclink
            4. region d:86-166 [38819] picpiclink
          3. 2pro picpic
            1. region a:5-85 [38820] picpiclink
            2. region a:86-158 [38821] picpiclink
            3. region b:4-85 [38822] picpiclink
            4. region b:86-158 [38823] picpiclink
            5. region c:18-85 [38824] picpiclink
            6. region c:86-158 [38825] picpiclink
  2. GMP synthetase C-terminal dimerisation domain [54810] (1)
    link to SUPERFAMILY database - Superfamily
    1. GMP synthetase C-terminal dimerisation domain [54811] (1)
      1. GMP synthetase C-terminal dimerisation domain [54812]
        1. Escherichia coli [TaxId: 562] [54813] (1)
          1. 1gpm picpicxrefxref
            complexed with amp, cit, mg, po4, pop
            1. region a:405-525 [38826] picpiclink
            2. region b:405-525 [38827] picpiclink
            3. region c:405-525 [38828] picpiclink
            4. region d:405-525 [38829] picpiclink
  3. Prokaryotic type KH domain (KH-domain type II) [54814] (1)
    Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
    link to SUPERFAMILY database - Superfamily
    1. Prokaryotic type KH domain (KH-domain type II) [54815] (9)
      1. Ribosomal protein S3 N-terminal domain [54816]
        1. Thermus thermophilus [TaxId: 274] [54817] (36)
          SQ P80372
          1. 2uub picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 6mz, cm0, k, mg, par, zn
            1. region c:2-106 [139933] picpiclink
          2. 1fjg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, scm, sry, zn
            1. region c:2-106 [38831] picpiclink
          3. 1j5e picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with unx, zn
            1. region c:2-106 [71544] picpiclink
          4. 2uxc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with k, mg, par, zn
            1. region c:2-106 [140004] picpiclink
          5. 2uuc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 6mz, cm0, k, mg, par, zn
            1. region c:2-106 [139953] picpiclink
          6. 2uua picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 6mz, cm0, k, mg, par, zn
            1. region c:2-106 [139913] picpiclink
          7. 1xmq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, t6a, zn
            1. region c:2-106 [115530] picpiclink
          8. 1n32 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, psu, zn
            1. region c:2-106 [79870] picpiclink
          9. 2uu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 6mz, cm0, k, mg, par, zn
            1. region c:2-106 [139893] picpiclink
          10. 1xnq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, zn
            1. region c:2-106 [115604] picpiclink
          11. 1xnr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, zn
            1. region c:2-106 [115626] picpiclink
          12. 1hr0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, zn
            1. region c:2-106 [38832] picpiclink
          13. 1hnz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with hyg, mg, zn
            1. region c:2-106 [38833] picpiclink
          14. 2j02 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 5mu, mg, par, zn
            1. region c:2-106 [137866] picpiclink
          15. 2j00 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 5mu, mg, par, zn
            1. region c:2-106 [137839] picpiclink
          16. 1xmo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, mnu, par, t6a, zn
            1. region c:2-106 [115500] picpiclink
          17. 1hnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, tac, zn
            1. region c:2-106 [38834] picpiclink
          18. 2e5l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with zn
            1. region c:2-106 [132025] picpiclink
          19. 1i94 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, wo2, zn
            1. region c:2-106 [61992] picpiclink
          20. 1hnx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, pcy, zn
            1. region c:2-106 [38835] picpiclink
          21. 1n33 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, par, psu, zn
            1. region c:2-106 [79892] picpiclink
          22. 2hhh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with ksg
            1. region c:2-106 [136477] picpiclink
          23. 1i96 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, wo2, zn
            1. region c:2-106 [62036] picpiclink
          24. 1n34 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. region c:2-106 [79914] picpiclink
          25. 1i97 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with mg, tac, wo2, zn
            1. region c:2-106 [62059] picpiclink
          26. 1n36 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. region c:2-106 [79937] picpiclink
          27. 1i95 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with ede, mg, wo2, zn
            1. region c:2-106 [62014] picpiclink
          28. 2f4v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with ab9, d2c, k, mg, zn
            1. region c:2-106 [132938] picpiclink
          29. 2hgp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            1. region f:2-106 [136421] picpiclink
          30. 2hgi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            1. region f:2-106 [136400] picpiclink
          31. 2hgr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            1. region f:2-106 [136442] picpiclink
          32. 2ow8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
            1. region d:2-106 [139399] picpiclink
          33. 1yl4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            1. region f:2-106 [123597] picpiclink
          34. 2b64 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with psu, yyg
            1. region c:2-106 [127933] picpiclink
          35. 2b9o picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with psu, yyg
            1. region c:2-106 [128163] picpiclink
          36. 2b9m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fjgc1
            complexed with psu, yyg
            1. region c:2-106 [128126] picpiclink
        2. Mouse (Mus musculus) [TaxId: 10090] [117914] (1)
          SQ P23396 17-95
          1. 1wh9 picpic
            Structural genomics target
            1. chain a [114637] picpiclink
        3. Escherichia coli [TaxId: 562] [160236] (24)
          SQ P0A7V3 1-105
          1. 2qal picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, nmy
            1. region c:1-105 [150214] picpiclink
          2. 2qan picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, nmy
            1. region c:1-105 [150268] picpiclink
          3. 2qbf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [150488] picpiclink
          4. 2qbd picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [150434] picpiclink
          5. 1vs5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with ksg, mg
            1. region c:1-105 [144436] picpiclink
          6. 3df1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with hyg, mg
            1. region c:1-105 [157603] picpiclink
          7. 3df3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with hyg, mg
            1. region c:1-105 [157657] picpiclink
          8. 1vs7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with ksg, mg
            1. region c:1-105 [144477] picpiclink
          9. 2qoy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, nmy, scm
            1. region c:1-105 [151091] picpiclink
          10. 2qp0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, nmy, scm
            1. region c:1-105 [151144] picpiclink
          11. 2avy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            Representative structure
            complexed with mg
            1. region c:1-105 [144843] picpiclink
          12. 2aw7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [144886] picpiclink
          13. 2qb9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with lll, mg
            1. region c:1-105 [150328] picpiclink
          14. 2qbb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with lll, mg
            1. region c:1-105 [150381] picpiclink
          15. 2i2p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [145421] picpiclink
          16. 2i2u picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [145463] picpiclink
          17. 2qbh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with lll, mg
            1. region c:1-105 [150542] picpiclink
          18. 2qbj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with lll, mg
            1. region c:1-105 [150596] picpiclink
          19. 2qou picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, scm
            1. region c:1-105 [150985] picpiclink
          20. 2qow picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, scm
            1. region c:1-105 [151038] picpiclink
          21. 2z4m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, par
            1. region c:1-105 [154106] picpiclink
          22. 2vho picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [153123] picpiclink
          23. 2z4k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg, par
            1. region c:1-105 [154052] picpiclink
          24. 2vhp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2AVY C:1-105
            complexed with mg
            1. region c:1-105 [153145] picpiclink
        4. Canis lupus familiaris [TaxId: 9615] [160237] (1)
          1. 2zkq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1wh9a_
            1. region c:17-95 [154591] picpiclink
      2. GTPase Era C-terminal domain [54818]
        1. Escherichia coli [TaxId: 562] [54819] (3)
          1. 1ega picpicxref
            complexed with so4
            1. region a:183-295 [38836] picpiclink
            2. region b:183-296 [38837] picpiclink
          2. 1x1l picpicxref
            automatically matched to d1egab2
            1. region x:183-295 [121591] picpiclink
          3. 1x18 picpicxrefxrefxrefxrefxref
            automatically matched to d1egab2
            complexed with du
            1. region x:183-295 [121578] picpiclink
        2. Thermus thermophilus [TaxId: 274] [117915] (1)
          SQ Q5SM23
          1. 1wf3 picpicxref
            Structural genomics target
            complexed with gnp, gol, mg
            1. region a:181-298 [114575] picpiclink
      3. Transcription factor NusA, C-terminal domains [69701]
        duplication: tandem repeat of two type II KH-domains
        1. Thermotoga maritima [TaxId: 2336] [69702] (2)
          1. 1hh2 picpicxrefxref
            1. region p:199-276 [65836] picpiclink
            2. region p:277-344 [65837] picpiclink
          2. 1l2f picpicxrefxref
            1. region a:199-276 [91045] picpiclink
            2. region a:277-344 [91046] picpiclink
        2. Mycobacterium tuberculosis [TaxId: 1773] [69703] (7)
          1. 2asb picpicxref
            automatically matched to d1k0ra2
            1. region a:184-262 [127245] picpiclink
          2. 2asb picpicxref
            automatically matched to d1k0ra3
            1. region a:263-329 [127246] picpiclink
          3. 1k0r picpicxrefxref
            complexed with so4
            1. region a:184-262 [67962] picpiclink
            2. region a:263-329 [67963] picpiclink
            3. region b:184-262 [67966] picpiclink
            4. region b:263-329 [67967] picpiclink
          4. 2atw picpicxrefxref
            automatically matched to d1k0ra2
            1. region a:184-262 [127310] picpiclink
          5. 2atw picpicxrefxref
            automatically matched to d1k0ra3
            1. region a:263-329 [127311] picpiclink
          6. 2atw picpicxrefxref
            automatically matched to d1k0ra2
            1. region c:184-262 [127313] picpiclink
          7. 2atw picpicxrefxref
            automatically matched to d1k0ra3
            1. region c:263-329 [127314] picpiclink
      4. Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6 [54803]
        the type of KH-domain fold (II or I) adopted by this domain is not ascertained yet
        1. Streptomyces antibioticus [TaxId: 1890] [54804] (2)
          1. 1e3h picpicxrefxrefxref
            partly disordered
            complexed with so4
            1. region a:579-632 [38810] picpiclink
          2. 1e3p picpicxrefxrefxrefxref
            partly disordered
            complexed with so4, wo4
            1. region a:579-634 [38811] picpiclink
  4. Probable GTPase Der, C-terminal domain [82653] (1)
    possible distant relative of the Era C-terminal domain lacking the KH motif
    link to SUPERFAMILY database - Superfamily
    1. Probable GTPase Der, C-terminal domain [82654] (1)
      1. Probable GTPase Der, C-terminal domain [82655]
        1. Thermotoga maritima [TaxId: 2336] [82656] (1)
          1. 1mky picpicxref
            complexed with gdp, mse, po4
            1. region a:359-439 [79252] picpiclink
  5. Ribosome-binding factor A, RbfA [89919] (1)
    possible distant homologue of the type I KH domain lacking the KH motif
    link to SUPERFAMILY database - Superfamily
    1. Ribosome-binding factor A, RbfA [89920] (5)
      1. Ribosome-binding factor A, RbfA [89921]
        1. Escherichia coli [TaxId: 562] [89922] (1)
          1. 1kkg picpic
            structural genomics
            1. chain a [84411] picpiclink
        2. Haemophilus influenzae [TaxId: 727] [89923] (1)
          HI1288
          1. 1jos picpic
            structural genomics
            CASP4
            RbfA homologue MPN156
            1. chain a [84191] picpiclink
        3. Mycoplasma pneumoniae [TaxId: 2104] [102931] (1)
          1. 1pa4 picpic
            structural genomics
            1. chain a [94409] picpiclink
        4. Human (Homo sapiens) [TaxId: 9606] [160238] (1)
          SQ Q8N0V3 86-201
          1. 2e7g picpic
            1. region a:86-201 [146701] picpiclink
        5. Thermus thermophilus [TaxId: 274] [160239] (3)
          SQ Q5SJV1 4-94
          1. 2dyj picpic
            1. region a:4-94 [146613] picpiclink
          2. 2dyj picpic
            automatically matched to 2DYJ A:4-94
            1. region b:4-92 [146614] picpiclink
          3. 2r1c picpic
            automatically matched to 2DYJ A:4-94
            1. region a:5-94 [151512] picpiclink
  6. YhbC-like, N-terminal domain [75420] (1)
    link to SUPERFAMILY database - Superfamily
    1. YhbC-like, N-terminal domain [75421] (1)
      1. Hypothetical protein SP14.3 (SP0552) [75422]
        1. Streptococcus pneumoniae [TaxId: 1313] [75423] (1)
          1. 1ib8 picpicxref
            structural genomics
            1. region a:1-90 [71169] picpiclink
  7. BolA-like [82657] (1)
    link to SUPERFAMILY database - Superfamily
    1. BolA-like [82658] (2)
      Pfam 01722
      1. BolA-like protein [82659]
        1. Mouse (Mus musculus) [TaxId: 10090] [82660] (1)
          1. 1v9j picpic
            structural genomics
            1. chain a [100542] picpiclink
      2. Hypothetical protein YrbA [110929]
        1. Escherichia coli [TaxId: 562] [110930] (1)
          SQ P43781
          1. 1ny8 picpic
            Structural genomics target
            1. chain a [103876] picpiclink
  8. Fe-S cluster assembly (FSCA) domain-like [117916] (2)
    similar putative active site with a conserved cysteine residue
    link to SUPERFAMILY database - Superfamily
    1. NifU C-terminal domain-like [117917] (3)
      Pfam 01106
      1. HIRA-interacting protein 5, HIRIP5 [117918]
        1. Mouse (Mus musculus) [TaxId: 10090] [117919] (1)
          SQ Q9QZ23 106-185
          1. 1veh picpic
            Structural genomics target
            1. chain a [113635] picpiclink
      2. Nitrogen fixation protein NifU homolog SE0630 [117920]
        1. Staphylococcus epidermidis [TaxId: 1282] [117921] (1)
          SQ Q8CPV7
          1. 1xhj picpic
            Structural genomics target
            1. chain a [115298] picpiclink
      3. NifU-like protein 1, NIFUL1 [143228]
        1. Rice (Oryza sativa) [TaxId: 4530] [143229] (1)
          SQ Q84LK7 154-226
          1. 1th5 picpic
            1. region a:154-226 [119263] picpiclink
    2. PaaD-like [117922] (2)
      Pfam 01883; DUF59
      1. Hypothetical protein TM0487 [117923]
        1. Thermotoga maritima [TaxId: 2336] [117924] (2)
          SQ Q9WYV7
          1. 1uwd picpic
            Structural genomics target
            1. chain a [113447] picpiclink
          2. 1wcj picpic
            Structural genomics target
            1. chain a [114509] picpiclink
      2. Hypothetical protein TTHB138 [143230]
        1. Thermus thermophilus [TaxId: 274] [143231] (2)
          SQ Q53W28 6-96
          1. 2cu6 picpic
            1. region a:6-96 [130803] picpiclink
          2. 2cu6 picpic
            automatically matched to 2CU6 A:6-96
            1. region b:6-96 [130804] picpiclink
  9. Cation efflux protein cytoplasmic domain-like [160240] (1)
    1. Cation efflux protein cytoplasmic domain-like [160241] (2)
      C=terminal part of Pfam 01545
      1. Putative Zinc transporter CzrB [160242]
        1. Thermus thermophilus [TaxId: 274] [160243] (3)
          SQ Q8VLX7 203-284
          1. 3byp picpic
            complexed with so4
            1. region a:6-87 [155726] picpiclink
          2. 3byp picpic
            automatically matched to 3BYP A:6-87
            complexed with so4
            1. region b:6-87 [155727] picpiclink
          3. 3byr picpic
            automatically matched to 3BYP A:6-87
            complexed with zn
            1. region a:6-87 [155731] picpiclink
      2. Ferrous-iron efflux pump FieF (YiiP) [160244]
        Also able to transport Zn(2+)
        1. Escherichia coli [TaxId: 562] [160245] (2)
          SQ P69380 209-290
          1. 2qfi picpicxrefxref
            complexed with zn
            1. region a:209-290 [150734] picpiclink
          2. 2qfi picpicxrefxref
            automatically matched to 2QFI A:209-290
            complexed with zn
            1. region b:209-290 [150736] picpiclink
  10. EspE N-terminal domain-like [160246] (1)
    contains extra C-terminal helix that packs against shorter N-terminal helix
    1. GSPII protein E N-terminal domain-like [160247] (2)
      Pfam 05157 (also includes PfamB 000210)
      1. Type II secretion ATPase XpsE [160248]
        contains extra N-terminal alpha-helical subdomain, that can form swapped dimers
        1. Xanthomonas campestris [TaxId: 339] [160249] (2)
          SQ P31742 1-148! SQ P31742 1-149
          1. 2d28 picpic
            complexed with cac; mutant
            1. region c:1-149 [146450] picpiclink
          2. 2d27 picpic
            1. region a:1-148 [146449] picpiclink
      2. General secretion pathway protein E, EpsE [160250]
        1. Vibrio cholerae [TaxId: 666] [160251] (2)
          SQ P37093 14-81
          1. 2bh1 picpicxrefxrefxrefxref
            complexed with ca
            1. region x:14-81 [144990] picpiclink
          2. 2bh1 picpicxrefxrefxrefxref
            automatically matched to 2BH1 X:14-81
            complexed with ca
            1. region y:14-81 [144991] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk