Structural Classification of Proteins

Superfamily: Ribosomal protein L22

: some topological similarity to prokaryotic ribosomal protein L17
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Ribosomal protein L22 [54842]
beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation
Superfamily: Ribosomal protein L22 [54843]
some topological similarity to prokaryotic ribosomal protein L17
uperfamily

Families:

Ribosomal protein L22 [54844] (5)
1. Ribosomal protein L22 [54845]
  1. Thermus aquaticus, subsp. Thermus thermophilus [TaxId: 271] [54846] (6)
    1. 1i4j
      mutant
      1. chain a [76734]
      2. chain b [76735]
    2. 1bxe
      complexed with cl; mutant
      1. chain a [38898]
    3. 1yl3
      automatically matched to d1bxea_
      1. region s:2-110 [123591]
    4. 2b66
      automatically matched to d1bxea_
      1. region w:2-110 [127967]
    5. 2b9n
      automatically matched to d1bxea_
      1. region w:2-110 [128159]
    6. 2b9p
      automatically matched to d1bxea_
      1. region w:2-110 [128196]
  2. Archaeon Haloarcula marismortui [TaxId: 2238] [54847] (58)
    SQ P10970
    1. 1vqo
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region r:1-150 [120379]
    2. 3cc2
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region r:1-150 [156187]
    3. 1vq8
      automatically matched to d1ffko_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region r:1-150 [120205]
    4. 1vqp
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region r:1-150 [120408]
    5. 1jj2
      complexed with cd, cl, k, mg, na
      1. chain q [63102]
    6. 1yhq
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
      1. region r:1-150 [123200]
    7. 1vql
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
      1. region r:1-150 [120292]
    8. 1vqk
      automatically matched to d1ffko_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region r:1-150 [120263]
    9. 1s72
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. chain r [105337]
    10. 1vqm
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region r:1-150 [120321]
    11. 3ccm
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156347]
    12. 1vqn
      automatically matched to d1ffko_
      complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region r:1-150 [120350]
    13. 3cc7
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156235]
    14. 1yi2
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
      1. region r:1-150 [123247]
    15. 1yij
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
      1. region r:1-150 [123315]
    16. 3ccu
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156443]
    17. 1vq7
      automatically matched to d1ffko_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
      1. region r:1-150 [120176]
    18. 3cce
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156275]
    19. 3ccl
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156323]
    20. 1vq4
      automatically matched to d1ffko_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
      1. region r:1-150 [120089]
    21. 2otl
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
      1. region r:1-150 [139363]
    22. 1vq5
      automatically matched to d1ffko_
      complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
      1. region r:1-150 [120118]
    23. 1vq9
      automatically matched to d1ffko_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region r:1-150 [120234]
    24. 3ccv
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156467]
    25. 3cpw
      automatically matched to d1ffko_
      complexed with ace, cd, cl, k, mg, na, sr, zld; mutant
      1. region q:1-150 [156917]
    26. 1m90
      complexed with aca, cd, cl, k, mg, na, pha, sps
      1. chain s [78857]
    27. 1yit
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
      1. region r:1-150 [123358]
    28. 1vq6
      automatically matched to d1ffko_
      complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
      1. region r:1-150 [120147]
    29. 3cc4
      automatically matched to d1ffko_
      complexed with 1ma, anm, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region r:1-150 [156211]
    30. 3ccq
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156371]
    31. 3cd6
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3; mutant
      1. region r:1-150 [156491]
    32. 2otj
      automatically matched to d1ffko_
      complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region r:1-150 [139334]
    33. 3ccs
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156419]
    34. 3cma
      automatically matched to d1ffko_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region r:1-150 [156787]
    35. 1yjw
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
      1. region r:1-150 [123482]
    36. 1nji
      complexed with cd, cl, clm, k, mg, na; mutant
      1. chain s [85810]
    37. 2qex
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, neg, omg, omu, psu, ur3
      1. region r:1-150 [150706]
    38. 3ccr
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156395]
    39. 1kqs
      complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
      1. chain q [68832]
    40. 3ccj
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region r:1-150 [156299]
    41. 1kc8
      complexed with bls, cd, cl, k, mg, na
      1. chain s [84374]
    42. 1yjn
      automatically matched to d1ffko_
      complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
      1. region r:1-150 [123450]
    43. 1n8r
      complexed with cd, cl, k, mg, na, vir; mutant
      1. chain s [85446]
    44. 1k73
      complexed with anm, cd, cl, k, mg, na
      1. chain s [84335]
    45. 1qvg
      complexed with cd, cl, k, mg, na
      1. chain q [96409]
    46. 1q82
      complexed with cd, cl, k, mg, na, ppu
      1. chain s [96146]
    47. 1qvf
      complexed with cd, cl, k, mg, na
      1. chain q [96379]
    48. 1yj9
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
      1. region r:1-150 [144648]
    49. 1q81
      complexed with cd, cl, k, mg, na, ppu
      1. chain s [96116]
    50. 1k9m
      complexed with cd, cl, k, mg, na, tyk
      1. chain s [72230]
    51. 1kd1
      complexed with cd, cl, k, mg, na, spr
      1. chain s [72341]
    52. 1k8a
      complexed with cai, cd, cl, k, mg, na
      1. chain s [72163]
    53. 1m1k
      complexed with cd, cl, k, mg, na, zit
      1. chain s [74401]
    54. 3cme
      automatically matched to d1ffko_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region r:1-150 [156824]
    55. 1q86
      complexed with cd, cl, k, mg, na, pha
      1. chain s [96184]
    56. 2qa4
      automatically matched to d1ffko_
      complexed with cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region r:1-150 [150191]
    57. 1q7y
      complexed with cd, cl, k, mg, na, po4, puy
      1. chain s [96082]
    58. 1ffk
      complexed with cd, k, mo3; mutant
      1. chain o [38899]
  3. Deinococcus radiodurans [TaxId: 1299] [160265] (6)
    SQ Q9RXJ7 8-134
    1. 2zjr
      Representative structure
      complexed with mg
      1. region p:8-134 [154569]
    2. 1xbp
      automatically matched to 2ZJR P:8-134
      complexed with mul
      1. region q:8-134 [145882]
    3. 2zjq
      automatically matched to 2ZJR P:8-134
      1. region p:8-134 [154540]
    4. 3cf5
      automatically matched to 2ZJR P:8-134
      complexed with mg, txx
      1. region p:8-134 [156556]
    5. 2zjp
      automatically matched to 2ZJR P:8-134
      complexed with mg, nsh, zn
      1. region p:8-134 [154508]
    6. 3dll
      automatically matched to 2ZJR P:8-134
      complexed with mg, zld, zn
      1. region p:8-134 [157793]
  4. Escherichia coli [TaxId: 562] [160266] (29)
    SQ P61175 1-110
    1. 2gyc
      automatically matched to 2AW4 S:1-110
      1. region q:5-110 [145273]
    2. 2gya
      automatically matched to 2AW4 S:1-110
      1. region q:5-110 [145251]
    3. 2qam
      automatically matched to 2AW4 S:1-110
      complexed with mg, nmy, zn
      1. region s:1-110 [150259]
    4. 2qao
      automatically matched to 2AW4 S:1-110
      complexed with mg, nmy, zn
      1. region s:1-110 [150312]
    5. 2i2t
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [145457]
    6. 2i2v
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [145499]
    7. 2qbe
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [150479]
    8. 2qbg
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [150533]
    9. 2qoz
      automatically matched to 2AW4 S:1-110
      complexed with mg, nmy, zn
      1. region s:1-110 [151135]
    10. 2qp1
      automatically matched to 2AW4 S:1-110
      complexed with mg, nmy, zn
      1. region s:1-110 [151188]
    11. 3df2
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [157648]
    12. 3df4
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [157702]
    13. 2qba
      automatically matched to 2AW4 S:1-110
      complexed with lll, mg, zn
      1. region s:1-110 [150372]
    14. 2qbc
      automatically matched to 2AW4 S:1-110
      complexed with lll, mg, zn
      1. region s:1-110 [150425]
    15. 2qbi
      automatically matched to 2AW4 S:1-110
      complexed with lll, mg, zn
      1. region s:1-110 [150587]
    16. 2qbk
      automatically matched to 2AW4 S:1-110
      complexed with lll, mg, zn
      1. region s:1-110 [150641]
    17. 2qov
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [151029]
    18. 2qox
      automatically matched to 2AW4 S:1-110
      complexed with mg, zn
      1. region s:1-110 [151082]
    19. 1vs6
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [144472]
    20. 1vs8
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [144513]
    21. 2aw4
      Representative structure
      complexed with mg
      1. region s:1-110 [144881]
    22. 2awb
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [144922]
    23. 2z4l
      automatically matched to 2AW4 S:1-110
      complexed with mg, par, zn
      1. region s:1-110 [154097]
    24. 2z4n
      automatically matched to 2AW4 S:1-110
      complexed with mg, par, zn
      1. region s:1-110 [154151]
    25. 2vhm
      automatically matched to 2AW4 S:1-110
      complexed with mg; mutant
      1. region s:1-110 [153082]
    26. 2vhn
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [153114]
    27. 2rdo
      automatically matched to 2AW4 S:1-110
      1. region s:1-110 [151959]
    28. 2j28
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [145638]
    29. 3bbx
      automatically matched to 2AW4 S:1-110
      complexed with mg
      1. region s:1-110 [155116]
  5. Thermus thermophilus [TaxId: 274] [160267] (6)
    1. 2j01
      automatically matched to d1bxea_
      1. region w:2-110 [145579]
    2. 2j03
      automatically matched to d1bxea_
      complexed with lys
      1. region w:2-110 [145606]
    3. 2hgq
      automatically matched to d1bxea_
      1. region v:2-110 [145356]
    4. 1vsa
      automatically matched to d1bxea_
      1. region q:2-110 [144528]
    5. 2hgj
      automatically matched to d1bxea_
      1. region v:2-110 [145324]
    6. 2hgu
      automatically matched to d1bxea_
      1. region v:2-110 [145388]