Structural Classification of Proteins
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Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain [55003]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Poly(A) polymerase, PAP, C-terminal domain [55004] (2)
    1. Poly(A) polymerase, PAP, C-terminal domain [55005]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [55006] (7)
        1. 2q66 picpicxrefxref
          automatically matched to d1fa0b1
          complexed with atp, edo, mg; mutant
          1. region a:352-529 [150059] picpiclink
        2. 2hhp picpicxrefxref
          automatically matched to d1fa0b1
          complexed with flc, mg
          1. region a:352-530 [136505] picpiclink
        3. 3c66 picpicxrefxrefxrefxref
          automatically matched to d1fa0b1
          complexed with gol, mes
          1. region a:352-530 [155971] picpiclink
        4. 3c66 picpicxrefxrefxrefxref
          automatically matched to d1fa0b1
          complexed with gol, mes
          1. region b:352-530 [155974] picpiclink
        5. 2o1p picpicxrefxrefxrefxref
          automatically matched to d1fa0b1
          1. region a:352-530 [138877] picpiclink
        6. 2o1p picpicxrefxrefxrefxref
          automatically matched to d1fa0b1
          1. region b:352-529 [138880] picpiclink
        7. 1fa0 picpicxrefxref
          complexed with 3ad, 3at, mn, pop
          1. region a:352-523 [39335] picpiclink
          2. region b:352-530 [39336] picpiclink
      2. Cow (Bos taurus) [TaxId: 9913] [55007] (3)
        SQ P25500 18-497
        1. 1q79 picpicxrefxref
          complexed with 3at, gol, mn
          1. region a:365-498 [104550] picpiclink
        2. 1f5a picpicxrefxref
          complexed with 3at, 3po, mn; mutant
          1. region a:365-498 [39337] picpiclink
        3. 1q78 picpicxrefxref
          complexed with 3at, mg
          1. region a:365-498 [104547] picpiclink
  2. Archaeal tRNA CCA-adding enzyme [102995] (1)
    decorated fold with a large insertion
    1. tRNA nucleotidyltransferase, C-terminal domain [102996]
      1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [102997] (28)
        SQ O28126
        1. 1r89 picpicxrefxref
          complexed with cl, ctp, mg, mn, na
          1. region a:258-437 [97223] picpiclink
        2. 1uet picpicxrefxref
          complexed with act, ca, mg
          1. region a:258-437 [99274] picpiclink
        3. 1r8c picpicxrefxref
          complexed with mn, na, utp
          1. region a:258-437 [97232] picpiclink
        4. 1r8b picpicxrefxref
          complexed with atp, cl, mg, mn, na
          1. region a:258-437 [97229] picpiclink
        5. 1ueu picpicxrefxref
          complexed with act, ctp, mg
          1. region a:258-437 [99277] picpiclink
        6. 1tfw picpicxrefxref
          complexed with atp, mg
          1. region a:258-437 [106864] picpiclink
          2. region b:258-437 [106867] picpiclink
          3. region c:258-437 [106870] picpiclink
          4. region d:258-437 [106873] picpiclink
        7. 1r8a picpicxrefxref
          complexed with mn, na
          1. region a:258-437 [97226] picpiclink
        8. 2dra picpicxrefxref
          automatically matched to d1r89a3
          complexed with atp, mg, so4
          1. region a:258-437 [131668] picpiclink
        9. 2dvi picpicxrefxref
          automatically matched to d1r89a3
          complexed with ctp, mg, so4
          1. region a:262-437 [131792] picpiclink
        10. 2dr8 picpicxrefxref
          automatically matched to d1r89a3
          complexed with ctp, mg, so4
          1. region a:258-437 [131662] picpiclink
        11. 1uev picpicxrefxref
          complexed with atp, ca, mg
          1. region a:258-437 [99280] picpiclink
        12. 2zh6 picpicxrefxref
          automatically matched to d1r89a3
          complexed with atp, mg, so4
          1. region a:258-437 [154450] picpiclink
        13. 2zh2 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154438] picpiclink
        14. 2zh3 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154441] picpiclink
        15. 2zh4 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154444] picpiclink
        16. 2zh5 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154447] picpiclink
        17. 2zh8 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154456] picpiclink
        18. 2dr7 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [131659] picpiclink
        19. 2dr9 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [131665] picpiclink
        20. 2drb picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [131671] picpiclink
        21. 2zh1 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154435] picpiclink
        22. 2dr5 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [131656] picpiclink
        23. 2zh9 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154459] picpiclink
        24. 2zhb picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154465] picpiclink
        25. 2zh7 picpicxrefxref
          automatically matched to d1r89a3
          complexed with so4
          1. region a:258-437 [154453] picpiclink
        26. 2zha picpicxrefxref
          automatically matched to d1r89a3
          complexed with ctp, mg, so4
          1. region a:258-437 [154462] picpiclink
        27. 1tfy picpicxrefxref
          complexed with ctp, mg
          1. region a:258-437 [106876] picpiclink
          2. region b:258-437 [106879] picpiclink
          3. region c:258-437 [106882] picpiclink
          4. region d:258-437 [106885] picpiclink
        28. 1sz1 picpicxrefxref
          complexed with 1ma, 2mg, 5mc, 5mu, 7mg, h2u, m2g, omc, omg, psu, yyg
          1. region a:258-437 [106135] picpiclink
          2. region b:258-437 [106138] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk