Structural Classification of Proteins
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Superfamily: MTH1187/YkoF-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: MTH1187/YkoF-like [89957]
    link to SUPERFAMILY database - Superfamily

Families:

  1. MTH1187-like [89958] (5)
    Pfam 01910; two domains form a single beta-sheet dimer; two dimers pack sheet-to-sheet in a tetramer; contains extra C-terminal helix
    1. Hypothetical protein MTH1187 [89959]
      1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [89960] (1)
        1. 1lxn picpic
          structural genomics; NESG target TT272
          complexed with mse, so4
          1. chain a [84737] picpiclink
          2. chain b [84738] picpiclink
          3. chain c [84739] picpiclink
          4. chain d [84740] picpiclink
    2. Hypothetical protein YB1001C [89961]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [89962] (1)
        1. 1lxj picpic
          structural genomics; NESG target Ytyst72
          complexed with mse, so4
          1. chain a [84736] picpiclink
    3. Hypothetical protein TM0486 [110985]
      1. Thermotoga maritima [TaxId: 2336] [110986] (1)
        SQ Q9WYV6
        1. 1vk8 picpic
          Structural genomics target
          complexed with unl
          1. chain a [108636] picpiclink
          2. chain b [108637] picpiclink
          3. chain c [108638] picpiclink
          4. chain d [108639] picpiclink
    4. Hypothetical protein BC0424 [143405]
      1. Bacillus cereus [TaxId: 1396] [143406] (2)
        SQ Q81IG4 1-101
        1. 1yqh picpic
          1. region a:1-101 [123886] picpiclink
        2. 1yqh picpic
          automatically matched to 1YQH A:1-101
          1. region b:1-101 [123887] picpiclink
    5. Hypothetical protein SP2199 [143407]
      1. Streptococcus pneumoniae [TaxId: 1313] [143408] (4)
        SQ Q97N67 1-90
        1. 2ibo picpic
          1. region a:1-90 [137197] picpiclink
        2. 2ibo picpic
          automatically matched to 2IBO A:1-90
          1. region b:1-90 [137198] picpiclink
        3. 2ibo picpic
          automatically matched to 2IBO A:1-90
          1. region c:1-90 [137199] picpiclink
        4. 2ibo picpic
          automatically matched to 2IBO A:1-90
          1. region d:1-90 [137200] picpiclink
  2. Putative thiamin/HMP-binding protein YkoF [110987] (1)
    duplication: one subunit consists of two domains assembled as in the MHT1178-like dimer
    1. Putative thiamin/HMP-binding protein YkoF [110988]
      1. Bacillus subtilis [TaxId: 1423] [110989] (3)
        SQ O34911
        1. 1s99 picpic
          complexed with act, ca; mutant
          1. chain a [112046] picpiclink
        2. 1s7h picpic
          Structural genomics target
          1. chain a [105349] picpiclink
          2. chain b [105350] picpiclink
          3. chain c [105351] picpiclink
          4. chain d [105352] picpiclink
        3. 1sbr picpic
          complexed with ca, vib; mutant
          1. chain a [112066] picpiclink
          2. chain b [112067] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk