Superfamily: Methyl-coenzyme M reductase subunits

each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Ferredoxin-like [54861]
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
4. Superfamily: Methyl-coenzyme M reductase subunits [55088]
   each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
   uperfamily

Families:

1. Methyl-coenzyme M reductase gamma chain [55089] (3)
   1. Methyl-coenzyme M reductase gamma chain [55090]
      1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [55091] (5)
         1. 1hbn
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. chain c [60902]
            2. chain f [60907]
         2. 1mro
            complexed with com, f43, gol, mgn, na, tp7, zn
            1. chain c [39437]
            2. chain f [39438]
         3. 1hbm
            complexed with cl, f43, gol, mg, mgn, na, sht, zn
            1. chain c [60892]
            2. chain f [60897]
         4. 1hbo
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. chain c [60912]
            2. chain f [60917]
         5. 1hbu
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. chain c [60922]
            2. chain f [60927]
      2. Archaeon Methanopyrus kandleri [TaxId: 2320] [55092] (1)
         1. 1e6v
            complexed with com, f43, tp7
            1. chain c [39439]
            2. chain f [39440]
      3. Archaeon Methanosarcina barkeri [TaxId: 2208] [55093] (1)
         1. 1e6y
            complexed with com, f43, gol, tp7
            1. chain c [39441]
            2. chain f [39442]
2. Methyl-coenzyme M reductase alpha and beta chain N-terminal domain [55094] (6)
   C-terminal domain is all-alpha
   1. Alpha chain [55095]
      1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [55096] (5)
         1. 1hbn
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region a:2-269 [60899]
            2. region d:2-269 [60904]
         2. 1mro
            complexed with com, f43, gol, mgn, na, tp7, zn
            1. region a:2-269 [39443]
            2. region d:2-269 [39444]
         3. 1hbm
            complexed with cl, f43, gol, mg, mgn, na, sht, zn
            1. region a:2-269 [60889]
            2. region d:2-269 [60894]
         4. 1hbo
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region a:2-269 [60909]
            2. region d:2-269 [60914]
         5. 1hbu
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region a:2-269 [60919]
            2. region d:2-269 [60924]
      2. Archaeon Methanopyrus kandleri [TaxId: 2320] [55097] (1)
         1. 1e6v
            complexed with com, f43, tp7
            1. region a:8-272 [39445]
            2. region d:8-272 [39446]
      3. Archaeon Methanosarcina barkeri [TaxId: 2208] [55098] (1)
         1. 1e6y
            complexed with com, f43, gol, tp7
            1. region a:1002-1283 [39447]
            2. region d:4002-4283 [39448]
   2. Beta chain [55099]
      1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [55100] (5)
         1. 1hbn
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region b:2-188 [60901]
            2. region e:2-188 [60906]
         2. 1mro
            complexed with com, f43, gol, mgn, na, tp7, zn
            1. region b:2-188 [39449]
            2. region e:2-188 [39450]
         3. 1hbm
            complexed with cl, f43, gol, mg, mgn, na, sht, zn
            1. region b:2-188 [60891]
            2. region e:2-188 [60896]
         4. 1hbo
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region b:2-188 [60911]
            2. region e:2-188 [60916]
         5. 1hbu
            complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
            1. region b:2-188 [60921]
            2. region e:2-188 [60926]
      2. Archaeon Methanopyrus kandleri [TaxId: 2320] [55101] (1)
         1. 1e6v
            complexed with com, f43, tp7
            1. region b:7-189 [39451]
            2. region e:7-189 [39452]
      3. Archaeon Methanosarcina barkeri [TaxId: 2208] [55102] (1)
         1. 1e6y
            complexed with com, f43, gol, tp7
            1. region b:2002-2185 [39453]
            2. region e:5002-5185 [39454]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk