Structural Classification of Proteins
home mail help root up expand collapse

Family: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain

C-terminal domain is all-alpha

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: Methyl-coenzyme M reductase subunits [55088]
    each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
    link to SUPERFAMILY database - Superfamily
  5. Family: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain [55094]
    C-terminal domain is all-alpha

Protein Domains:

  1. Alpha chain [55095]
    1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [55096] (5)
      1. 1hbn picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region a:2-269 [60899] picpiclink
        2. region d:2-269 [60904] picpiclink
      2. 1mro picpicxrefxrefxrefxref
        complexed with com, f43, gol, mgn, na, tp7, zn
        1. region a:2-269 [39443] picpiclink
        2. region d:2-269 [39444] picpiclink
      3. 1hbm picpicxrefxrefxrefxref
        complexed with cl, f43, gol, mg, mgn, na, sht, zn
        1. region a:2-269 [60889] picpiclink
        2. region d:2-269 [60894] picpiclink
      4. 1hbo picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region a:2-269 [60909] picpiclink
        2. region d:2-269 [60914] picpiclink
      5. 1hbu picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region a:2-269 [60919] picpiclink
        2. region d:2-269 [60924] picpiclink
    2. Archaeon Methanopyrus kandleri [TaxId: 2320] [55097] (1)
      1. 1e6v picpicxrefxrefxrefxref
        complexed with com, f43, tp7
        1. region a:8-272 [39445] picpiclink
        2. region d:8-272 [39446] picpiclink
    3. Archaeon Methanosarcina barkeri [TaxId: 2208] [55098] (1)
      1. 1e6y picpicxrefxrefxrefxref
        complexed with com, f43, gol, tp7
        1. region a:1002-1283 [39447] picpiclink
        2. region d:4002-4283 [39448] picpiclink
  2. Beta chain [55099]
    1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [55100] (5)
      1. 1hbn picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region b:2-188 [60901] picpiclink
        2. region e:2-188 [60906] picpiclink
      2. 1mro picpicxrefxrefxrefxref
        complexed with com, f43, gol, mgn, na, tp7, zn
        1. region b:2-188 [39449] picpiclink
        2. region e:2-188 [39450] picpiclink
      3. 1hbm picpicxrefxrefxrefxref
        complexed with cl, f43, gol, mg, mgn, na, sht, zn
        1. region b:2-188 [60891] picpiclink
        2. region e:2-188 [60896] picpiclink
      4. 1hbo picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region b:2-188 [60911] picpiclink
        2. region e:2-188 [60916] picpiclink
      5. 1hbu picpicxrefxrefxrefxref
        complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
        1. region b:2-188 [60921] picpiclink
        2. region e:2-188 [60926] picpiclink
    2. Archaeon Methanopyrus kandleri [TaxId: 2320] [55101] (1)
      1. 1e6v picpicxrefxrefxrefxref
        complexed with com, f43, tp7
        1. region b:7-189 [39451] picpiclink
        2. region e:7-189 [39452] picpiclink
    3. Archaeon Methanosarcina barkeri [TaxId: 2208] [55102] (1)
      1. 1e6y picpicxrefxrefxrefxref
        complexed with com, f43, gol, tp7
        1. region b:2002-2185 [39453] picpiclink
        2. region e:5002-5185 [39454] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk