Structural Classification of Proteins
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Family: Transposase IS200-like

Pfam 01797

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: Transposase IS200-like [143422]
    contains extra N-terminal hairpin and C-terminal helix, both are involved in dimerization; there can be helix-swapping in the dimer
    link to SUPERFAMILY database - Superfamily
  5. Family: Transposase IS200-like [143423]
    Pfam 01797

Protein Domains:

  1. Putative transposase SSO1474 [143424]
    1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [143425] (4)
      SQ Q97Y68 2-131
      1. 2f5g picpic
        automatically matched to 2F4F A:2-131
        1. region a:2-131 [132991] picpiclink
      2. 2f5g picpic
        automatically matched to 2F4F A:2-131
        1. region b:2-131 [132992] picpiclink
      3. 2f4f picpic
        complexed with mn
        1. region a:2-131 [132920] picpiclink
      4. 2f4f picpic
        automatically matched to 2F4F A:2-131
        complexed with mn
        1. region b:2-131 [132921] picpiclink
  2. ISHP608 transposase [143426]
    1. Helicobacter pylori [TaxId: 210] [143427] (14)
      SQ Q933Z0 4-133
      1. 2vjv picpic
        automatically matched to d2a6ma1
        complexed with mg
        1. region a:6-130 [153201] picpiclink
      2. 2vjv picpic
        automatically matched to d2a6ma1
        complexed with mg
        1. region b:6-130 [153202] picpiclink
      3. 2vju picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region a:6-131 [153199] picpiclink
      4. 2vju picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region b:6-131 [153200] picpiclink
      5. 2vih picpic
        automatically matched to d2a6ma1
        1. region a:6-131 [153168] picpiclink
      6. 2vih picpic
        automatically matched to d2a6ma1
        1. region b:6-131 [153169] picpiclink
      7. 2vic picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region a:6-131 [153166] picpiclink
      8. 2vic picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region b:6-131 [153167] picpiclink
      9. 2a6o picpic
        automatically matched to 2A6M A:4-133
        1. region a:4-133 [126291] picpiclink
      10. 2a6o picpic
        automatically matched to 2A6M A:4-133
        1. region b:4-133 [126292] picpiclink
      11. 2a6m picpic
        1. region a:4-133 [126287] picpiclink
      12. 2a6m picpic
        automatically matched to 2A6M A:4-133
        1. region b:4-133 [126288] picpiclink
      13. 2vhg picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region a:6-131 [153056] picpiclink
      14. 2vhg picpic
        automatically matched to d2a6ma1
        complexed with mn
        1. region b:6-131 [153057] picpiclink
  3. Putative transposase DR0177 [143428]
    1. Deinococcus radiodurans [TaxId: 1299] [143429] (2)
      SQ Q9RXX8 1-130
      1. 2fyx picpic
        complexed with gol
        1. region a:1-130 [134411] picpiclink
      2. 2fyx picpic
        automatically matched to 2FYX A:1-130
        complexed with gol
        1. region b:1-130 [134412] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk