Superfamily: Bacterial polysaccharide co-polymerase-like

Decorated common fold with extra helical regions, which facilitate oligomerization

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Ferredoxin-like [54861]
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
4. Superfamily: Bacterial polysaccharide co-polymerase-like [160355]
   Decorated common fold with extra helical regions, which facilitate oligomerization

Families:

1. FepE-like [160356] (3)
   the ferredoxin-like fold resides mainly on in the N-terminal part that corresponds to Pfam 02706 (Wzz)
   1. Chain length determinant protein WzzB [160357]
      1. Salmonella typhimurium [TaxId: 90371] [160358] (5)
         SQ Q04866 54-292
         1. 3b8p
            1. region a:54-292 [154981]
         2. 3b8p
            automatically matched to 3B8P A:54-292
            1. region b:55-292 [154982]
         3. 3b8p
            automatically matched to 3B8P A:54-292
            1. region c:54-292 [154983]
         4. 3b8p
            automatically matched to 3B8P A:54-292
            1. region d:54-292 [154984]
         5. 3b8p
            automatically matched to 3B8P A:54-292
            1. region e:54-292 [154985]
   2. Lipopolysaccharide biosynthesis protein WzzE [160359]
      1. Escherichia coli [TaxId: 562] [160360] (8)
         SQ P0AG01 54-318
         1. 3b8o
            1. region a:55-319 [154973]
         2. 3b8o
            automatically matched to 3B8O A:55-319
            1. region b:55-319 [154974]
         3. 3b8o
            automatically matched to 3B8O A:55-319
            1. region c:55-319 [154975]
         4. 3b8o
            automatically matched to 3B8O A:55-319
            1. region d:55-319 [154976]
         5. 3b8o
            automatically matched to 3B8O A:55-319
            1. region e:55-319 [154977]
         6. 3b8o
            automatically matched to 3B8O A:55-319
            1. region f:55-319 [154978]
         7. 3b8o
            automatically matched to 3B8O A:55-319
            1. region g:55-319 [154979]
         8. 3b8o
            automatically matched to 3B8O A:55-319
            1. region h:55-319 [154980]
   3. Enterochelin transport protein FepE [160361]
      1. Escherichia coli [TaxId: 562] [160362] (12)
         SQ Q8XBV8 64-330! SQ Q8XBV8 65-330
         1. 3b8m
            1. region a:64-330 [154961]
         2. 3b8m
            automatically matched to 3B8M A:64-330
            1. region b:64-330 [154962]
         3. 3b8m
            automatically matched to 3B8M A:64-330
            1. region c:64-330 [154963]
         4. 3b8n
            1. region a:65-330 [154964]
         5. 3b8n
            automatically matched to 3B8N A:65-330
            1. region b:65-330 [154965]
         6. 3b8n
            automatically matched to 3B8N A:65-330
            1. region c:65-330 [154966]
         7. 3b8n
            automatically matched to 3B8N A:65-330
            1. region d:65-330 [154967]
         8. 3b8n
            automatically matched to 3B8N A:65-330
            1. region e:65-330 [154968]
         9. 3b8n
            automatically matched to 3B8N A:65-330
            1. region f:65-330 [154969]
         10. 3b8n
             automatically matched to 3B8N A:65-330
             1. region g:65-330 [154970]
         11. 3b8n
             automatically matched to 3B8N A:65-330
             1. region h:65-330 [154971]
         12. 3b8n
             automatically matched to 3B8N A:65-330
             1. region i:65-330 [154972]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk