Structural Classification of Proteins
home mail help root up expand collapse

Fold: Folate-binding domain

duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Folate-binding domain [103024]
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands

Superfamilies:

  1. Folate-binding domain [103025] (2)
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
    link to SUPERFAMILY database - Superfamily
    1. Aminomethyltransferase folate-binding domain [103026] (5)
      1. N,N-dimethylglycine oxidase domain 3 [103027]
        1. Arthrobacter globiformis [TaxId: 1665] [103028] (3)
          1. 1pj5 picpicxrefxrefxref
            complexed with act, fad, na
            1. region a:428-742 [94745] picpiclink
          2. 1pj6 picpicxrefxrefxref
            complexed with fad, fol, na
            1. region a:428-742 [94749] picpiclink
          3. 1pj7 picpicxrefxrefxref
            complexed with fad, fon, na
            1. region a:428-742 [94753] picpiclink
      2. Hypothetical protein YgfZ, N-terminal domain [103029]
        1. Escherichia coli [TaxId: 562] [103030] (2)
          SQ P39179
          1. 1vly picpicxref
            Structural genomics target
            complexed with act, ca, cl, edo
            1. region a:3-243 [108872] picpiclink
          2. 1nrk picpicxref
            structural genomics
            complexed with so4
            1. region a:1-243 [92090] picpiclink
      3. Glycine cleavage system T protein, GcvT [111012]
        1. Thermotoga maritima [TaxId: 2336] [111013] (4)
          SQ Q9WY54
          1. 1wos picpicxref
            1. region a:1-278 [109469] picpiclink
          2. 1wor picpicxref
            complexed with red
            1. region a:1-278 [109467] picpiclink
          3. 1wop picpicxref
            complexed with fon
            1. region a:1-278 [109461] picpiclink
          4. 1woo picpicxref
            complexed with thl
            1. region a:1-278 [109459] picpiclink
        2. Escherichia coli [TaxId: 562] [111014] (1)
          SQ P27248
          1. 1vlo picpicxref
            Structural genomics target
            mutant
            1. region a:4-277 [108839] picpiclink
        3. Pyrococcus horikoshii [TaxId: 53953] [117996] (1)
          SQ O58888
          1. 1v5v picpicxref
            complexed with gol, peg
            1. region a:3-312 [113540] picpiclink
            2. region b:3-312 [113542] picpiclink
    2. TrmE formyl-THF-binding domain [117997] (1)
      dimeric biological unit; one subunit domain corresponds to one "unswapped" subdomain of the other family
      1. TrmE formyl-THF-binding domain [117998]
        1. Thermotoga maritima [TaxId: 2336] [117999] (2)
          SQ Q9WYA4
          1. 1xzp picpicxrefxref
            complexed with so4
            1. region a:1-117 [116256] picpiclink
            2. region b:1-117 [116257] picpiclink
          2. 1xzq picpicxrefxref
            complexed with fon
            1. region a:2-117 [116260] picpiclink
            2. region b:1-117 [116261] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk