Structural Classification of Proteins
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Fold: Probable bacterial effector-binding domain

duplication of beta-alpha-beta(2) motif: antiparallel beta sheet forms barrel (n=6, S=12)

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Probable bacterial effector-binding domain [55135]
    duplication of beta-alpha-beta(2) motif: antiparallel beta sheet forms barrel (n=6, S=12)

Superfamilies:

  1. Probable bacterial effector-binding domain [55136] (4)
    link to SUPERFAMILY database - Superfamily
    1. Gyrase inhibitory protein GyrI (SbmC, YeeB) [75462] (1)
      1. Gyrase inhibitory protein GyrI (SbmC, YeeB) [75463]
        1. Escherichia coli [TaxId: 562] [75464] (1)
          1. 1jyh picpic
            structural genomics
            1. chain a [71956] picpiclink
    2. Multidrug-binding domain of transcription activator BmrR [55137] (1)
      1. Multidrug-binding domain of transcription activator BmrR [55138]
        1. Bacillus subtilis [TaxId: 1423] [55139] (9)
          SQ P39075
          1. 1r8e picpicxref
            complexed with 119, gol, imd
            1. region a:121-277 [104844] picpiclink
          2. 3d6z picpicxref
            automatically matched to d1bowa_
            complexed with gol, rhq; mutant
            1. region a:121-277 [157415] picpiclink
          3. 3d71 picpicxref
            automatically matched to d1bowa_
            complexed with etf, flc, imd, pgo, zn; mutant
            1. region a:121-277 [157419] picpiclink
          4. 3d6y picpicxref
            automatically matched to d1bowa_
            complexed with ber, gol; mutant
            1. region a:121-277 [157413] picpiclink
          5. 3d70 picpicxref
            automatically matched to d1bowa_
            complexed with gol, imd; mutant
            1. region a:121-277 [157417] picpiclink
          6. 1bow picpic
            complexed with mn
            1. chain a [39528] picpiclink
          7. 2bow picpic
            complexed with mn, p4p, so4
            1. chain a [39529] picpiclink
          8. 1exj picpicxref
            protein/DNA complex; complexed with 119, na, zn
            1. region a:121-277 [39530] picpiclink
          9. 1exi picpicxref
            protein/DNA complex; complexed with 118, zn
            1. region a:121-277 [39531] picpiclink
    3. Rob transcription factor, C-terminal domain [55140] (1)
      1. Rob transcription factor, C-terminal domain [55141]
        1. Escherichia coli [TaxId: 562] [55142] (1)
          1. 1d5y picpicxref
            protein/DNA complex
            1. region a:122-294 [39532] picpiclink
            2. region b:122-294 [39533] picpiclink
            3. region c:122-294 [39534] picpiclink
            4. region d:122-294 [39535] picpiclink
    4. SOUL heme-binding protein [143481] (1)
      Pfam 04832
      1. Heme-binding protein 1 [143482]
        p22HBP
        1. Mouse (Mus musculus) [TaxId: 10090] [143483] (2)
          SQ Q9R257 1-190! SQ Q9R257 7-190
          1. 2gov picpic
            1. region a:7-190 [135447] picpiclink
          2. 2hva picpic
            1. region a:1-190 [136800] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk