Structural Classification of Proteins
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Superfamily: Probable bacterial effector-binding domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Probable bacterial effector-binding domain [55135]
    duplication of beta-alpha-beta(2) motif: antiparallel beta sheet forms barrel (n=6, S=12)
  4. Superfamily: Probable bacterial effector-binding domain [55136]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Gyrase inhibitory protein GyrI (SbmC, YeeB) [75462] (1)
    1. Gyrase inhibitory protein GyrI (SbmC, YeeB) [75463]
      1. Escherichia coli [TaxId: 562] [75464] (1)
        1. 1jyh picpic
          structural genomics
          1. chain a [71956] picpiclink
  2. Multidrug-binding domain of transcription activator BmrR [55137] (1)
    1. Multidrug-binding domain of transcription activator BmrR [55138]
      1. Bacillus subtilis [TaxId: 1423] [55139] (9)
        SQ P39075
        1. 1r8e picpicxref
          complexed with 119, gol, imd
          1. region a:121-277 [104844] picpiclink
        2. 3d6z picpicxref
          automatically matched to d1bowa_
          complexed with gol, rhq; mutant
          1. region a:121-277 [157415] picpiclink
        3. 3d71 picpicxref
          automatically matched to d1bowa_
          complexed with etf, flc, imd, pgo, zn; mutant
          1. region a:121-277 [157419] picpiclink
        4. 3d6y picpicxref
          automatically matched to d1bowa_
          complexed with ber, gol; mutant
          1. region a:121-277 [157413] picpiclink
        5. 3d70 picpicxref
          automatically matched to d1bowa_
          complexed with gol, imd; mutant
          1. region a:121-277 [157417] picpiclink
        6. 1bow picpic
          complexed with mn
          1. chain a [39528] picpiclink
        7. 2bow picpic
          complexed with mn, p4p, so4
          1. chain a [39529] picpiclink
        8. 1exj picpicxref
          protein/DNA complex; complexed with 119, na, zn
          1. region a:121-277 [39530] picpiclink
        9. 1exi picpicxref
          protein/DNA complex; complexed with 118, zn
          1. region a:121-277 [39531] picpiclink
  3. Rob transcription factor, C-terminal domain [55140] (1)
    1. Rob transcription factor, C-terminal domain [55141]
      1. Escherichia coli [TaxId: 562] [55142] (1)
        1. 1d5y picpicxref
          protein/DNA complex
          1. region a:122-294 [39532] picpiclink
          2. region b:122-294 [39533] picpiclink
          3. region c:122-294 [39534] picpiclink
          4. region d:122-294 [39535] picpiclink
  4. SOUL heme-binding protein [143481] (1)
    Pfam 04832
    1. Heme-binding protein 1 [143482]
      p22HBP
      1. Mouse (Mus musculus) [TaxId: 10090] [143483] (2)
        SQ Q9R257 1-190! SQ Q9R257 7-190
        1. 2gov picpic
          1. region a:7-190 [135447] picpiclink
        2. 2hva picpic
          1. region a:1-190 [136800] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk